Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC113398.2-201ENST00000507630 558 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AC008126.1-201ENST00000549019 480 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AC084033.1-201ENST00000550830 633 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 MIR4505-201ENST00000582238 73 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AC007448.1-201ENST00000582714 234 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 FAM72A-208ENST00000607379 1139 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AL451049.1-201ENST00000608672 497 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 BX323046.1-201ENST00000610145 535 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 NF1P10-201ENST00000613227 742 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 MIR6826-201ENST00000617808 98 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 AL691477.1-201ENST00000624398 162 ntBASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
NPIPA2E9PIF3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CIR1P2-201ENST00000514821 1342 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC130304.1-201ENST00000622942 2385 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 EI24P3-201ENST00000399046 1062 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 GTF3AP1-201ENST00000416942 1004 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AL691447.1-201ENST00000419456 387 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 UBE2V2P1-201ENST00000434717 398 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 OSTCP1-201ENST00000455507 450 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC110749.1-201ENST00000462007 357 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 RNA5SP362-201ENST00000516048 118 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 SNORA43.3-201ENST00000517240 103 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC244502.2-201ENST00000543361 851 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 FO393422.1-201ENST00000603908 708 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AL589674.2-201ENST00000604304 337 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC022467.1-201ENST00000614738 749 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 OR8G7P-201ENST00000616658 848 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 RN7SL544P-201ENST00000617232 284 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 RN7SL763P-201ENST00000620922 284 ntBASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NPIPA2E9PIF3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 AC092070.2-203ENST00000598377 3644 ntBASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA2E9PIF3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms