Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 HSPA8P11-201ENST00000508840 1898 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 HMGB1P5-201ENST00000255320 642 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 FUNDC2P3-201ENST00000334716 533 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 RNU6-1200P-201ENST00000384162 107 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 U3.25-201ENST00000391209 220 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL034374.1-201ENST00000406329 351 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 CDY14P-201ENST00000431260 1014 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 CXCR2P1-202ENST00000443392 1074 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 RPL31P44-201ENST00000447680 377 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 PRDX1P1-201ENST00000449329 596 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 CDY23P-201ENST00000451661 1014 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL606490.1-201ENST00000452266 765 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC104689.1-201ENST00000473356 768 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 RPS6P4-201ENST00000494693 758 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC016144.1-201ENST00000548175 1087 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC090651.1-201ENST00000567865 634 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC004805.3-201ENST00000603178 310 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 AC211433.2-201ENST00000608433 387 ntBASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TMEM88BA6NKF7 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
TMEM88BA6NKF7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 AC007996.1-201ENST00000620414 2821 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 AC012078.1-201ENST00000405035 1646 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 AC025263.3-201ENST00000622965 1396 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 SNORA58B-201ENST00000364259 136 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 SNORA51.9-201ENST00000384295 124 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 AC006511.2-201ENST00000388966 660 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 TMSB4XP8-201ENST00000402089 135 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 TMSB4XP6-201ENST00000415187 135 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 RPL21P50-201ENST00000417698 477 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 OR6C64P-201ENST00000419708 825 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 AL022100.1-202ENST00000421214 548 ntBASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.89□□□□□ -1.15
TMEM88BA6NKF7 TMSB4XP1-201ENST00000424567 135 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms