Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SHQ1P1-201ENST00000437111 1544 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP69-201ENST00000365390 305 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 MIR433-201ENST00000384837 93 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 HMGN1P20-201ENST00000411849 300 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 MTATP6P20-201ENST00000414147 562 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RPS17P17-201ENST00000419392 409 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC066692.1-201ENST00000421721 457 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 DEFB130D-201ENST00000426866 237 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 SOCS5P1-201ENST00000440415 949 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 MORF4-201ENST00000447135 971 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 SNORD11.1-201ENST00000459482 85 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SL369P-201ENST00000477138 299 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 EIF1P7-201ENST00000487533 337 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SL101P-201ENST00000496350 279 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC006499.4-201ENST00000510947 694 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 ASNSP4-201ENST00000511103 447 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC133963.2-201ENST00000513686 578 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP287-201ENST00000516546 266 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RNA5SP206-201ENST00000516703 121 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 HAUS1P3-201ENST00000523909 662 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 TRIM77BP-201ENST00000524985 1119 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AL132857.1-201ENST00000555180 708 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AP001160.4-201ENST00000596971 382 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC099785.1-201ENST00000605697 437 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC006924.1-201ENST00000610750 559 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 AC093225.1-201ENST00000506867 1408 ntBASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHB1Q9Y5F3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AL157702.1-201ENST00000398764 426 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP206-201ENST00000410823 293 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SKP108-201ENST00000411367 328 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 UBE2V1P11-201ENST00000411559 285 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 TMA16P2-201ENST00000413187 601 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 Z68694.1-201ENST00000413929 841 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 BMS1P13-201ENST00000417301 885 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AC009506.2-201ENST00000420635 840 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AC104843.2-201ENST00000427666 297 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 MTND2P5-201ENST00000432656 1006 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AL157827.1-201ENST00000447622 132 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RN7SL326P-201ENST00000477493 296 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 LARP7P4-201ENST00000481075 878 ntBASIC6.24□□□□□ -1.41
PCDHB1Q9Y5F3 RPL12P30-201ENST00000488389 499 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms