Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 CR383656.5-201ENST00000547616 1340 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 RN7SKP29-201ENST00000410957 272 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 RNGTTP1-201ENST00000420965 728 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 BX284632.2-201ENST00000421091 399 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AL512605.1-202ENST00000441919 381 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AL359955.2-201ENST00000445380 353 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC023271.1-201ENST00000445936 1090 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC002553.2-201ENST00000453217 340 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 RN7SL197P-201ENST00000466981 299 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LSM3P4-201ENST00000502948 309 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 GAPDHP71-201ENST00000511530 1003 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC122134.1-201ENST00000565664 1104 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 NANOGP3-201ENST00000605855 286 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AL353729.2-201ENST00000605859 1249 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 MIR6133-201ENST00000617057 108 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 HCFC2P1-201ENST00000392864 1592 ntBASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDD3Q9Y3P4 AC117409.1-201ENST00000470499 1310 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 TMSB4XP2-201ENST00000335179 210 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 MIR133A2-201ENST00000347538 102 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 EI24P3-201ENST00000399046 1062 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC019205.1-201ENST00000421830 730 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC069154.1-201ENST00000432914 542 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 HMGB3P10-201ENST00000434734 572 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 EIF5AP4-201ENST00000441206 465 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC090602.1-201ENST00000469695 252 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AL122020.1-201ENST00000472287 459 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 OR11I1P-201ENST00000486033 954 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 OR5H7P-201ENST00000514084 930 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 IGLV3-30-201ENST00000524362 298 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC027369.2-201ENST00000528030 440 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 EIF4A2P5-201ENST00000529914 499 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 AC137627.1-201ENST00000545761 289 ntBASIC4.97□□□□□ -1.61
RHBDD3Q9Y3P4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms