Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AL158214.1-201ENST00000444423 404 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AL590004.3-202ENST00000445883 451 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC012512.1-201ENST00000446594 718 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AL929410.2-201ENST00000451170 189 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SNX18P25-201ENST00000510539 758 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC074255.1-201ENST00000511259 501 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC021193.1-201ENST00000511607 420 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC122688.1-201ENST00000541494 223 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC127381.1-201ENST00000555979 939 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC011270.1-201ENST00000558606 583 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC005632.2-201ENST00000564271 828 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 DHFRP1-201ENST00000579682 559 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 RN7SL32P-201ENST00000580514 281 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AP005136.2-201ENST00000583253 1049 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 MIR6732-201ENST00000619365 60 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 uc_338.7-201ENST00000621834 124 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01355-201ENST00000566551 5444 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC018717.1-201ENST00000457712 1505 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 OR55B1P-203ENST00000641518 2602 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 Y_RNA.62-201ENST00000362840 99 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC005042.1-201ENST00000393397 800 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC073465.2-201ENST00000440938 498 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 EIF5AP4-201ENST00000441206 465 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AL445466.1-201ENST00000448432 357 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 RPL31P11-202ENST00000454082 372 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC098583.1-201ENST00000480875 255 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 RPL12P30-201ENST00000488389 499 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC117500.1-201ENST00000497352 755 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC079064.1-201ENST00000528365 362 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 HNRNPRP2-201ENST00000528421 743 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC139697.1-201ENST00000548429 745 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AL121839.1-201ENST00000556233 1185 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AGGF1P7-201ENST00000562369 913 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC023206.1-201ENST00000605824 298 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC092681.3-201ENST00000609463 678 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC010632.3-201ENST00000611377 369 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 CASC19-221ENST00000641309 1382 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AP001642.1-201ENST00000624727 2117 ntBASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCNIP3Q9Y2W7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.65
KCNIP3Q9Y2W7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.71□□□□□ -1.65
KCNIP3Q9Y2W7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms