Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC083982.1-201ENST00000485679 344 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 MIR4691-201ENST00000583764 85 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 MIR378J-201ENST00000611988 109 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC015712.7-201ENST00000615211 635 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC104581.5-201ENST00000624171 7141 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC100757.1-201ENST00000616872 1835 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AL645733.1-201ENST00000402250 217 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 RPL7P56-201ENST00000429441 717 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC092324.1-201ENST00000468671 324 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 RN7SKP66-201ENST00000516681 231 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AL627230.1-201ENST00000613077 211 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AL591926.8-201ENST00000616876 211 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNVU1-6-201ENST00000364688 164 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RPL11P3-201ENST00000395256 523 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RAB28P1-201ENST00000411517 641 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AC093655.2-201ENST00000425735 631 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AC091912.1-201ENST00000511351 248 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AC108738.1-201ENST00000603703 237 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AC091905.4-201ENST00000623432 202 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 CCDC162P-202ENST00000368966 6751 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.91□□□□□ -1.3
SCN11AQ9UI33 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN11AQ9UI33 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 RPS11P7-201ENST00000442125 465 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 MIR4697-201ENST00000582977 78 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC093799.2-201ENST00000610062 578 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC244107.2-201ENST00000611773 76 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC015660.5-201ENST00000623238 564 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC073869.8-201ENST00000641806 335 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.9□□□□□ -1.3
SCN11AQ9UI33 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN11AQ9UI33 AC079097.1-201ENST00000512187 1399 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms