Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL512605.1-202ENST00000441919 381 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL359955.2-201ENST00000445380 353 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL157827.1-201ENST00000447622 132 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC069277.2-201ENST00000454211 432 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC015908.1-201ENST00000478739 476 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 MTND3P3-201ENST00000505004 126 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 SNORA58-201ENST00000505219 137 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC108043.1-201ENST00000512696 574 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 RNU6-1102P-201ENST00000516149 96 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 WBP1LP3-201ENST00000523033 208 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 MIR4700-201ENST00000578311 74 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC005244.1-201ENST00000582566 339 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC068020.1-201ENST00000594215 661 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC130352.1-201ENST00000602979 661 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 MIR1264-201ENST00000616374 69 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL035661.1-201ENST00000620459 1144 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 OR8G3P-202ENST00000641572 1255 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
USP35Q9P2H5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
USP35Q9P2H5 CASC19-281ENST00000642118 1554 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 MSL3P1-202ENST00000440028 1468 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 FAM32BP-201ENST00000344033 333 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 SNORD8-201ENST00000363915 110 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 RNU1-59P-201ENST00000364829 162 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 RNU6-729P-201ENST00000384399 107 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 BX679664.2-201ENST00000439282 283 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AL353898.1-201ENST00000444055 238 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 RPL5P13-201ENST00000462840 709 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 NPM1P17-201ENST00000479221 602 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC093815.1-201ENST00000508637 280 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC093510.2-201ENST00000562820 896 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC120053.1-201ENST00000607706 736 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 U1.25-201ENST00000614085 162 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 AL163051.2-201ENST00000618976 735 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 U1.31-201ENST00000620022 160 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC116667.2-201ENST00000641075 823 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.27□□□□□ -1.09
USP35Q9P2H5 AC006213.6-201ENST00000623722 4179 ntBASIC8.27□□□□□ -1.09
USP35Q9P2H5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.26□□□□□ -1.09
USP35Q9P2H5 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.26□□□□□ -1.09
USP35Q9P2H5 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.26□□□□□ -1.09
USP35Q9P2H5 PROS2P-201ENST00000474651 1951 ntBASIC8.26□□□□□ -1.09
USP35Q9P2H5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USP35Q9P2H5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
USP35Q9P2H5 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.26□□□□□ -1.09
USP35Q9P2H5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USP35Q9P2H5 RNU4-7P-201ENST00000364758 141 ntBASIC8.26□□□□□ -1.09
USP35Q9P2H5 RNU6-650P-201ENST00000365658 111 ntBASIC8.26□□□□□ -1.09
USP35Q9P2H5 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
USP35Q9P2H5 RNU6-31P-201ENST00000384388 108 ntBASIC8.26□□□□□ -1.09
USP35Q9P2H5 DPPA2P3-201ENST00000411853 655 ntBASIC8.26□□□□□ -1.09
USP35Q9P2H5 RPL35AP31-201ENST00000418340 337 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms