Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FO393422.1-201ENST00000603908 708 ntBASIC5.83□□□□□ -1.48
RPRD1AQ96P16 AC004477.3-201ENST00000614061 590 ntBASIC5.83□□□□□ -1.48
RPRD1AQ96P16 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.83□□□□□ -1.48
RPRD1AQ96P16 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RPRD1AQ96P16 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RPRD1AQ96P16 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.83□□□□□ -1.48
RPRD1AQ96P16 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
RPRD1AQ96P16 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.83□□□□□ -1.48
RPRD1AQ96P16 MTCO1P7-201ENST00000419523 1542 ntBASIC5.83□□□□□ -1.48
RPRD1AQ96P16 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC025470.1-201ENST00000510053 2032 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 MIR133A2-201ENST00000347538 102 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 RNA5SP242-201ENST00000364171 118 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL512422.1-201ENST00000407033 553 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 OR6E1P-201ENST00000414424 923 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL596448.1-201ENST00000415024 392 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC006335.2-201ENST00000437993 330 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 KRT8P51-201ENST00000438938 274 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC073909.1-201ENST00000447112 999 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 PPIAP20-201ENST00000449839 135 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AP000547.1-201ENST00000454360 617 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC023141.9-201ENST00000458734 412 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 RPSAP39-201ENST00000467439 883 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 PDCL3P4-201ENST00000489621 720 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 RN7SL101P-201ENST00000496350 279 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 SNORD95-201ENST00000579879 68 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC011445.2-201ENST00000599274 173 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL691477.1-201ENST00000624398 162 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC007683.2-201ENST00000624681 714 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 MIR4302-201ENST00000638058 60 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 AL158152.1-201ENST00000602652 1435 ntBASIC5.82□□□□□ -1.48
RPRD1AQ96P16 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RPRD1AQ96P16 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 RN7SKP279-201ENST00000411383 298 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 RN7SKP293-201ENST00000411389 296 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AL513325.1-201ENST00000417716 1034 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AL133173.1-201ENST00000423458 397 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 CHEK2P5-201ENST00000423877 246 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 TMEM183AP1-205ENST00000432739 290 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC106872.4-201ENST00000510050 523 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC021146.10-201ENST00000515628 706 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 IGLV3-24-201ENST00000517477 197 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 MRPS21P7-201ENST00000566937 238 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 DHFRP1-201ENST00000579682 559 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 MIR4311-201ENST00000580794 100 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC060780.2-201ENST00000589047 198 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC104695.2-201ENST00000605056 775 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 AC132825.8-201ENST00000640783 297 ntBASIC5.81□□□□□ -1.48
RPRD1AQ96P16 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPRD1AQ96P16 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms