Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL035407.2-201ENST00000454090 378 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MEF2AP1-201ENST00000454867 863 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CEACAMP11-201ENST00000455211 583 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC083806.1-201ENST00000468934 316 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RN7SL655P-201ENST00000486087 298 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RN7SL350P-201ENST00000492591 299 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC104971.1-201ENST00000495117 578 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC005178.1-201ENST00000508392 440 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CR383658.1-201ENST00000514609 734 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RNA5SP318-201ENST00000516352 92 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AP006587.5-201ENST00000532033 739 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AP000619.3-201ENST00000535634 1127 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 HIGD1AP17-201ENST00000554576 276 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AL121834.1-201ENST00000572284 509 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 IGLJCOR18-201ENST00000584002 424 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC093765.1-201ENST00000603758 881 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC100767.2-201ENST00000604840 693 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC011374.2-201ENST00000607135 526 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 VN1R7P-201ENST00000619242 903 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC010435.1-201ENST00000623353 1177 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RPL23AP61-201ENST00000623642 466 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC034229.6-201ENST00000623704 224 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AL603839.4-201ENST00000624658 1005 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC027279.4-201ENST00000624371 2072 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MAPK10-383ENST00000642032 3390 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RPL12P13-201ENST00000310055 497 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RN7SKP118-201ENST00000364331 330 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL049610.1-201ENST00000423374 372 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 GAPDHP57-201ENST00000424400 585 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 MTCO1P19-201ENST00000443487 500 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC010240.2-201ENST00000445363 1205 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RBMY3AP-201ENST00000449381 1145 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 H3F3AP5-201ENST00000475267 429 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RN7SL259P-201ENST00000478499 253 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms