Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 LINC01613-201ENST00000561476 2780 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC083843.2-201ENST00000568248 6253 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 RNA5SP110-201ENST00000362638 115 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 MIR137-201ENST00000385223 102 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL136116.2-201ENST00000404020 785 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 SNORA79B-201ENST00000410557 148 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 RPL35AP31-201ENST00000418340 337 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL512637.1-201ENST00000439523 1231 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 RPS10P18-201ENST00000442662 495 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 TXNP2-201ENST00000443918 295 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL590004.3-202ENST00000445883 451 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL603882.1-201ENST00000463059 681 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 RN7SL188P-201ENST00000469842 285 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 RPL12P24-201ENST00000474907 486 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 HMGN1P17-201ENST00000513734 295 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 GAPDHP62-201ENST00000515313 990 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 SNORA74.1-201ENST00000516320 180 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 RNA5SP434-201ENST00000516647 121 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC068993.1-201ENST00000546724 589 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 MRPS21P8-201ENST00000569196 235 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL645933.2-201ENST00000606743 1207 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL139407.1-201ENST00000613826 1175 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC012676.3-201ENST00000614983 479 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AL162574.1-201ENST00000615702 950 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 AC009032.1-201ENST00000617574 431 ntBASIC5.12□□□□□ -1.59
RFT1Q96AA3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.12□□□□□ -1.59
RFT1Q96AA3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFT1Q96AA3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC007938.2-201ENST00000604666 2634 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 MTATP6P19-201ENST00000413797 659 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL356806.1-201ENST00000422524 916 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 RPL12P12-201ENST00000424633 501 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 NPM1P22-201ENST00000427761 952 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 MTCO1P45-201ENST00000431457 267 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC096632.2-201ENST00000438139 1239 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC097359.1-201ENST00000447946 463 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC002553.3-201ENST00000453002 341 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC104164.1-201ENST00000460282 590 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC004890.1-201ENST00000461005 181 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC005165.2-201ENST00000466070 380 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 AC083795.1-201ENST00000491760 320 ntBASIC5.11□□□□□ -1.59
RFT1Q96AA3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms