Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 AP001284.1-201ENST00000528393 2118 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HPS3Q969F9 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.62□□□□□ -1.35
HPS3Q969F9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HPS3Q969F9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 RNU1-65P-201ENST00000363919 148 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 MIR323B-201ENST00000385269 82 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.62□□□□□ -1.35
HPS3Q969F9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.62□□□□□ -1.35
HPS3Q969F9 RPS26P38-201ENST00000414476 348 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 RPL35AP3-201ENST00000414680 288 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 MTND4LP13-201ENST00000425022 298 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 DSTNP5-201ENST00000427921 523 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 CUBNP2-201ENST00000443534 1139 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 RPL23AP23-201ENST00000452590 471 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC016724.1-201ENST00000453215 421 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 OR4A17P-201ENST00000526032 904 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC084121.1-201ENST00000533882 835 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AL512310.9-201ENST00000553311 948 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 MIR4760-201ENST00000585040 80 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.62□□□□□ -1.35
HPS3Q969F9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AL021918.2-201ENST00000613415 194 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 MIR6861-201ENST00000618657 64 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 FAM27E2-201ENST00000619668 403 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AL136228.1-201ENST00000622221 319 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC090617.9-201ENST00000623751 147 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 AC073592.6-201ENST00000624271 415 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AP001052.1-201ENST00000626421 99 ntBASIC6.62□□□□□ -1.35
HPS3Q969F9 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.62□□□□□ -1.35
HPS3Q969F9 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.62□□□□□ -1.35
HPS3Q969F9 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HPS3Q969F9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC007159.1-201ENST00000566529 4706 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 MIR16-2-201ENST00000362117 81 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 GNG5P2-201ENST00000372054 207 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 RNU6-1000P-201ENST00000391066 106 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 AL096800.1-201ENST00000405326 893 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AL034379.1-201ENST00000423216 253 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AL645931.1-201ENST00000439737 410 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC104164.1-201ENST00000460282 590 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 RPL38P3-201ENST00000484463 213 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 RN7SL205P-201ENST00000490174 284 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC112518.2-201ENST00000508565 425 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 RNA5SP340-201ENST00000517132 107 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 NDUFA5P11-201ENST00000567995 343 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms