Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 RN7SKP127-201ENST00000410443 354 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-CQ95604 AL139128.1-201ENST00000413921 941 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AL672212.1-201ENST00000422246 400 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 HMGB3P12-201ENST00000438745 556 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 AL845321.1-201ENST00000444603 348 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-CQ95604 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-CQ95604 RN7SL37P-201ENST00000490461 307 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC008040.4-201ENST00000494834 768 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 OR7E99P-201ENST00000505750 922 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC131392.1-201ENST00000506490 633 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 CHCHD2P7-201ENST00000508008 452 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC138866.2-201ENST00000508650 584 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 GUSBP9-201ENST00000510138 584 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-CQ95604 RNU6-1261P-201ENST00000517194 104 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 MIR4800-201ENST00000537353 80 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC122134.1-201ENST00000565664 1104 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 H3F3BP2-201ENST00000583907 357 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC011373.1-201ENST00000607270 237 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-CQ95604 MIR7109-201ENST00000613748 65 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC005618.4-201ENST00000625053 554 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 AC110994.2-201ENST00000635481 492 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC068870.3-201ENST00000625077 2536 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8□□□□□ -1.13
HLA-CQ95604 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 AC114980.1-201ENST00000505668 3157 ntBASIC8□□□□□ -1.13
HLA-CQ95604 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8□□□□□ -1.13
HLA-CQ95604 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 AC087045.3-201ENST00000623046 2468 ntBASIC8□□□□□ -1.13
HLA-CQ95604 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8□□□□□ -1.13
HLA-CQ95604 RNU12-2P-201ENST00000364789 156 ntBASIC8□□□□□ -1.13
HLA-CQ95604 RNU6-1122P-201ENST00000384449 107 ntBASIC8□□□□□ -1.13
HLA-CQ95604 SNORA10B-201ENST00000384458 133 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC092642.1-201ENST00000392417 425 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC104297.1-201ENST00000393779 870 ntBASIC8□□□□□ -1.13
HLA-CQ95604 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8□□□□□ -1.13
HLA-CQ95604 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-CQ95604 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 DNAJA1P6-201ENST00000437347 354 ntBASIC8□□□□□ -1.13
HLA-CQ95604 SEPT14P3-201ENST00000439401 183 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AL732372.2-207ENST00000445840 183 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC8□□□□□ -1.13
HLA-CQ95604 AC005517.1-201ENST00000452091 489 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8□□□□□ -1.13
HLA-CQ95604 SEPT14P2-201ENST00000453405 183 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC098818.1-201ENST00000478593 252 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC079080.1-201ENST00000479841 822 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC009269.1-202ENST00000484381 469 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC104687.1-201ENST00000485829 412 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC093809.1-201ENST00000509155 340 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC048346.1-201ENST00000510247 144 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8□□□□□ -1.13
HLA-CQ95604 SEPT14P4-201ENST00000513445 186 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8□□□□□ -1.13
HLA-CQ95604 FO082796.1-201ENST00000523795 183 ntBASIC8□□□□□ -1.13
HLA-CQ95604 DEFB131D-201ENST00000526803 184 ntBASIC8□□□□□ -1.13
HLA-CQ95604 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms