Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC097063.1-201ENST00000426714 1797 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC068870.3-201ENST00000625077 2536 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 GNL2P1-201ENST00000451274 2190 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP128-201ENST00000364270 303 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RNU6-152P-201ENST00000384037 107 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 GCNT1P4-201ENST00000404096 329 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RPL35AP3-201ENST00000414680 288 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 HMGB1P7-201ENST00000450921 612 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RN7SL254P-201ENST00000460609 284 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RN7SL269P-201ENST00000467795 305 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RN7SL568P-201ENST00000493069 298 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC010460.2-201ENST00000509054 677 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AP003033.2-201ENST00000528901 805 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC090424.1-201ENST00000535243 736 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC009712.1-201ENST00000564938 316 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC093591.2-201ENST00000565254 3843 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC006115.2-201ENST00000596823 202 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC245884.10-201ENST00000597355 337 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC005776.1-201ENST00000603164 290 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC120053.1-201ENST00000607706 736 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 OR51C1P-201ENST00000608504 942 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC111152.1-202ENST00000635848 339 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC099654.15-201ENST00000639802 509 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RBPJP7-201ENST00000442803 1447 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RBPJP5-201ENST00000449433 1447 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLIP4Q8N3C7 AC144833.1-201ENST00000567953 4089 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 MTATP6P31-201ENST00000406985 692 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 PTGES3P2-201ENST00000407942 482 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 MRPS33P4-201ENST00000434892 317 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 AL445928.1-201ENST00000435545 222 ntBASIC5.44□□□□□ -1.54
CLIP4Q8N3C7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms