Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RPL21P50-201ENST00000417698 477 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 RPL12P43-201ENST00000420608 499 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 MTND4P28-201ENST00000426217 387 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC003989.1-201ENST00000434569 565 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 CXCR2P1-202ENST00000443392 1074 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 RNU7-125P-201ENST00000458760 62 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 RPS12P31-201ENST00000491419 398 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 RNU6-943P-201ENST00000516960 98 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 HMGB1P46-201ENST00000520062 610 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL512310.9-201ENST00000553311 948 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 MTCO3P24-201ENST00000572729 782 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL031601.1-201ENST00000605702 394 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AF250324.2-201ENST00000608299 610 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AP001437.1-201ENST00000608783 456 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL096712.1-201ENST00000614561 159 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC099842.1-201ENST00000619919 596 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC022140.2-201ENST00000623500 188 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC079248.2-201ENST00000623779 326 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AL357562.1-201ENST00000624911 609 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 AC096992.2-201ENST00000609553 1684 ntBASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TMEFF1Q8IYR6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC079949.2-201ENST00000617117 2933 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AL355974.1-201ENST00000618896 1708 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 RNU4-4P-201ENST00000364588 130 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AL589994.1-201ENST00000404962 340 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 NPM1P36-201ENST00000415681 835 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 MORF4L1P5-201ENST00000433352 961 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 ELOCP8-201ENST00000439309 332 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 ELOCP15-201ENST00000442090 332 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 PTENP1-201ENST00000447117 1215 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC068228.1-201ENST00000461723 211 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC015864.1-201ENST00000496512 544 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC095052.1-201ENST00000509955 863 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 FABP5P6-201ENST00000510588 409 ntBASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.51□□□□□ -1.37
TMEFF1Q8IYR6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms