Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AC113412.1-201ENST00000425840 504 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 VTI1BP4-201ENST00000427516 527 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 CYCSP51-201ENST00000443545 318 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 RSU1P1-201ENST00000453416 441 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 RN7SL466P-201ENST00000497546 295 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL589674.2-201ENST00000604304 337 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL035661.1-201ENST00000620459 1144 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL691477.1-201ENST00000624398 162 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 PWAR1-201ENST00000624188 2414 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 AP001029.2-203ENST00000589795 4910 ntBASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.85□□□□□ -1.47
RFWD3Q6PCD5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL442128.2-201ENST00000620246 1824 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL121776.1-201ENST00000429337 372 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 NPM1P18-201ENST00000434232 732 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC012075.1-201ENST00000436549 580 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC006335.2-201ENST00000437993 330 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL390119.1-201ENST00000440329 312 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 MEMO1P4-201ENST00000453590 386 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AL136038.1-201ENST00000497246 351 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 DUTP7-201ENST00000507982 486 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 IGLV3-24-201ENST00000517477 197 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AGGF1P7-201ENST00000562369 913 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 MRPS21P7-201ENST00000566937 238 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 MIR1273E-201ENST00000581165 102 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFWD3Q6PCD5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
RFWD3Q6PCD5 OR9K1P-202ENST00000641111 3217 ntBASIC5.84□□□□□ -1.48
RFWD3Q6PCD5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFWD3Q6PCD5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms