Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC008079.2-201ENST00000623543 20396 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 RNA5SP326-201ENST00000363209 110 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 RNU2-22P-201ENST00000411266 212 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL358176.3-201ENST00000420757 454 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL353662.1-201ENST00000439099 327 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 IGBP1P3-201ENST00000447449 1000 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC005077.1-201ENST00000449226 375 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AP000797.2-201ENST00000475768 606 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC098976.1-201ENST00000513014 541 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AP001000.1-201ENST00000526843 742 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC096996.1-201ENST00000563813 325 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL008729.2-201ENST00000606393 473 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL135999.3-201ENST00000610501 812 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 MIR6885-201ENST00000612241 66 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC090607.5-201ENST00000615692 224 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 Z95331.1-201ENST00000623075 23112 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AC008627.1-201ENST00000517511 1704 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 AL359715.3-201ENST00000569267 2123 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC104964.3-201ENST00000606115 2860 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 DDX18P6-201ENST00000450119 1997 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 CASC19-204ENST00000641001 2055 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC120338.1-201ENST00000625074 1541 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 HSPA8P18-201ENST00000439846 1928 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 OR9K1P-201ENST00000326513 941 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 RN7SKP292-201ENST00000365522 317 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 SNORA48.4-201ENST00000391089 134 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AL035422.1-201ENST00000414193 397 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 HMGN1P17-201ENST00000513734 295 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC138517.1-201ENST00000515724 568 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 RNU6-1334P-201ENST00000516032 105 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 NMNAT1P5-201ENST00000559657 841 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC127024.5-201ENST00000580085 462 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 H3F3BP2-201ENST00000583907 357 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AC012676.3-201ENST00000614983 479 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 AL357140.4-201ENST00000636827 412 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
CCDC58Q4VC31 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC58Q4VC31 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms