Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
SSBP1Q04837 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP1Q04837 AL035422.1-201ENST00000414193 397 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP1Q04837 AC006335.2-201ENST00000437993 330 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 GAPDHP58-201ENST00000438477 1006 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 BX842559.2-201ENST00000451418 605 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 RN7SL254P-201ENST00000460609 284 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 AC063955.1-201ENST00000462872 685 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 RN7SL814P-201ENST00000487715 300 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 AC105031.1-201ENST00000518550 476 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP1Q04837 PCNAP4-201ENST00000532690 730 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP1Q04837 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP1Q04837 RN7SL356P-201ENST00000582228 248 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.59□□□□□ -1.67
SSBP1Q04837 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP1Q04837 AL135999.3-201ENST00000610501 812 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP1Q04837 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSBP1Q04837 MIR6793-201ENST00000612376 63 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP1Q04837 AL138820.1-201ENST00000617901 5305 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 AL357140.4-201ENST00000636827 412 ntBASIC4.59□□□□□ -1.67
SSBP1Q04837 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SSBP1Q04837 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP1Q04837 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
SSBP1Q04837 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
SSBP1Q04837 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP1Q04837 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP1Q04837 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 AL672167.1-204ENST00000641875 3017 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC005294.1-201ENST00000355509 281 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 MIR551A-201ENST00000385042 96 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 ARSFP1-201ENST00000398758 477 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AL078599.1-201ENST00000402075 293 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AL133260.1-201ENST00000405720 405 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 BX284632.2-201ENST00000421091 399 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 OR2AH1P-201ENST00000425717 928 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AL022331.1-201ENST00000429025 477 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AC126120.1-201ENST00000431082 470 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 VN1R110P-201ENST00000438988 971 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AL512605.1-202ENST00000441919 381 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AL359955.2-201ENST00000445380 353 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC109464.1-201ENST00000511091 819 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 HMGN1P17-201ENST00000513734 295 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 RN7SKP46-201ENST00000515942 234 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AC131935.1-201ENST00000524621 333 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 OR8G3P-201ENST00000533406 921 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP1Q04837 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP1Q04837 AC012368.3-201ENST00000604190 219 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 U91328.4-201ENST00000608919 517 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 AC022106.2-201ENST00000620114 757 ntBASIC4.58□□□□□ -1.68
SSBP1Q04837 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP1Q04837 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms