Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 YES1P1-201ENST00000418510 1628 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 OR4F13P-202ENST00000560066 2054 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 LINC02019-201ENST00000608605 2060 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 AL121886.1-201ENST00000358609 435 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 RNA5SP326-201ENST00000363209 110 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.02□□□□□ -1.61
H3F3AP84243 SNORA5.1-201ENST00000384275 131 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 REREP1Y-201ENST00000422655 198 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AC007161.1-204ENST00000423039 460 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
H3F3AP84243 TMEM183AP1-205ENST00000432739 290 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 REREP2Y-201ENST00000439103 200 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 RPL12P11-201ENST00000439970 501 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 HMGN1P36-201ENST00000446623 298 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 RPS23P9-201ENST00000448848 438 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AC083899.1-201ENST00000454465 3819 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 AC012123.2-201ENST00000485809 248 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 TMEM97P2-201ENST00000517841 403 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.02□□□□□ -1.61
H3F3AP84243 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.02□□□□□ -1.61
H3F3AP84243 OR51C1P-201ENST00000608504 942 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 RNA5SP440-201ENST00000612665 119 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AP001962.1-201ENST00000624114 559 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 AC007683.2-201ENST00000624681 714 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 AC008691.1-209ENST00000642094 814 ntBASIC5.02□□□□□ -1.61
H3F3AP84243 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
H3F3AP84243 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
H3F3AP84243 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.01□□□□□ -1.61
H3F3AP84243 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.01□□□□□ -1.61
H3F3AP84243 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.01□□□□□ -1.61
H3F3AP84243 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
H3F3AP84243 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 RNA5SP122-201ENST00000384457 108 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AL009179.1-201ENST00000406085 265 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 RMRPP5-201ENST00000411156 267 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 OR2AT2P-201ENST00000413438 905 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 BX276092.6-201ENST00000430476 250 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.01□□□□□ -1.61
H3F3AP84243 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.01□□□□□ -1.61
H3F3AP84243 BX276092.8-201ENST00000455722 250 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 LDHBP2-201ENST00000456969 1005 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 NXT1P1-201ENST00000458481 316 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 RPS26P24-201ENST00000497656 331 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 GLUD1P3-202ENST00000508551 200 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AC074087.1-201ENST00000512059 724 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC122688.1-201ENST00000541494 223 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC009852.2-201ENST00000567898 485 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC008521.2-201ENST00000591021 259 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.01□□□□□ -1.61
H3F3AP84243 AC025574.2-201ENST00000615621 514 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 AC079776.5-201ENST00000641920 211 ntBASIC5.01□□□□□ -1.61
H3F3AP84243 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
H3F3AP84243 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
H3F3AP84243 AC138907.8-201ENST00000623981 2256 ntBASIC5□□□□□ -1.61
H3F3AP84243 AC004076.2-201ENST00000620532 3323 ntBASIC5□□□□□ -1.61
H3F3AP84243 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5□□□□□ -1.61
H3F3AP84243 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms