Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 OLMALINC-203ENST00000641087 3779 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 ZNF652P1-201ENST00000442420 1309 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PRKDCP78527 RNA5SP317-201ENST00000410176 116 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 RNA5SP311-201ENST00000411290 116 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKDCP78527 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 RPL7L1P8-201ENST00000469911 741 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 RNA5SP315-201ENST00000516340 116 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 RNA5SP312-201ENST00000517068 116 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 RNA5SP251-201ENST00000410614 137 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKDCP78527 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PRKDCP78527 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.76□□□□□ -1.81
PRKDCP78527 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 AC021106.3-201ENST00000623925 531 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKDCP78527 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 AL627171.1-201ENST00000618845 1308 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKDCP78527 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PRKDCP78527 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PRKDCP78527 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKDCP78527 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.76□□□□□ -1.81
PRKDCP78527 RN7SKP276-201ENST00000516242 268 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.76□□□□□ -1.81
PRKDCP78527 AP000619.2-201ENST00000546014 969 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 AF131215.7-201ENST00000602443 707 ntBASIC3.76□□□□□ -1.81
PRKDCP78527 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PRKDCP78527 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 AL353763.1-201ENST00000624467 1628 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 AP000350.7-201ENST00000624923 8030 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 MIR551A-201ENST00000385042 96 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 SNORA11.1-201ENST00000408133 129 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC008280.1-201ENST00000418851 412 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKDCP78527 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 RPS17P2-201ENST00000461663 408 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 RN7SKP83-201ENST00000516512 178 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 SOX5P1-201ENST00000524155 1127 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKDCP78527 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 LRRC37A4P-202ENST00000581296 5372 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 CAST-222ENST00000508579 1758 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKDCP78527 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKDCP78527 DHFRP1-201ENST00000579682 559 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AP005131.7-201ENST00000610087 611 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 AP003400.2-201ENST00000624036 666 ntBASIC3.75□□□□□ -1.81
PRKDCP78527 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKDCP78527 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKDCP78527 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms