Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HMGB3P18-201ENST00000406327 590 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 RNA5SP431-201ENST00000410312 120 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AL663061.1-201ENST00000416625 580 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX6-1P78426 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL050341.1-201ENST00000447743 313 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 NDUFA5P5-201ENST00000468361 342 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AP002884.1-201ENST00000479691 655 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 MTCYBP35-201ENST00000503630 1137 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC111193.1-201ENST00000504097 155 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC091849.1-201ENST00000509920 121 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC106800.2-201ENST00000514009 1103 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC011352.2-201ENST00000514574 1016 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AP001636.2-201ENST00000525517 696 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC005519.1-201ENST00000554490 601 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC009097.3-201ENST00000563557 1018 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX6-1P78426 GARSP1-201ENST00000570895 719 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 OR1E3-201ENST00000575608 948 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 RN7SL404P-201ENST00000582421 281 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC007448.1-201ENST00000582714 234 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC008536.1-201ENST00000602872 669 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AC091133.5-201ENST00000603088 301 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX6-1P78426 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 AC131009.3-201ENST00000621809 287 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 AP002782.1-201ENST00000623107 614 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX6-1P78426 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 RACGAP1P-201ENST00000550663 1879 ntBASIC5.81□□□□□ -1.48
NKX6-1P78426 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX6-1P78426 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX6-1P78426 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX6-1P78426 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 AL391261.1-201ENST00000555712 1479 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 RNA5SP321-201ENST00000362722 111 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 RNA5SP140-201ENST00000364524 92 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 MIR513B-201ENST00000385136 84 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 MCTS2P-201ENST00000394552 546 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.8□□□□□ -1.48
NKX6-1P78426 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX6-1P78426 RNU4-22P-201ENST00000411058 166 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AC013404.1-201ENST00000413068 249 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 BTF3P8-201ENST00000414577 526 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 RPS24P7-201ENST00000416921 246 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 RPS3AP37-201ENST00000419176 745 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 GTF2IP2-201ENST00000424290 697 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX6-1P78426 AC002542.1-201ENST00000440683 193 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AL589880.1-201ENST00000448271 287 ntBASIC5.8□□□□□ -1.48
NKX6-1P78426 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX6-1P78426 RPL26P30-201ENST00000453533 435 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms