Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4□□□□□ -1.77
CKS1BP61024 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 MRPL45P2-203ENST00000573318 473 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC006120.1-201ENST00000579375 546 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 RN7SL475P-201ENST00000583379 298 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC006115.2-201ENST00000596823 202 ntBASIC4□□□□□ -1.77
CKS1BP61024 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
CKS1BP61024 AL049829.3-202ENST00000604278 711 ntBASIC4□□□□□ -1.77
CKS1BP61024 AC022106.1-201ENST00000612834 766 ntBASIC4□□□□□ -1.77
CKS1BP61024 AL162574.1-201ENST00000615702 950 ntBASIC4□□□□□ -1.77
CKS1BP61024 OR51C1P-202ENST00000641159 1444 ntBASIC4□□□□□ -1.77
CKS1BP61024 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CKS1BP61024 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4□□□□□ -1.77
CKS1BP61024 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4□□□□□ -1.77
CKS1BP61024 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 ASNSP1-201ENST00000518311 1939 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 CASC19-246ENST00000641625 1606 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.99□□□□□ -1.77
CKS1BP61024 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 FANCD2P2-201ENST00000437591 1400 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 AC003045.1-201ENST00000398779 713 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 AL033519.1-201ENST00000407266 307 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 CRIP1P1-201ENST00000427567 185 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC108479.1-201ENST00000431142 427 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CKS1BP61024 AL357520.1-201ENST00000441557 453 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 OR2L9P-201ENST00000444456 913 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 COX4I1P2-201ENST00000447446 547 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC016027.4-201ENST00000450866 277 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 MEMO1P4-201ENST00000453590 386 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 AL133351.3-201ENST00000454998 193 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 EIF2S2P5-201ENST00000457635 968 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 TFP1-201ENST00000460564 572 ntTSL 4 BASIC3.99□□□□□ -1.77
CKS1BP61024 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 RN7SL836P-201ENST00000476140 296 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 RN7SL502P-201ENST00000481857 290 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 TFP1-203ENST00000490470 561 ntTSL 4 BASIC3.99□□□□□ -1.77
CKS1BP61024 EIF4E2P2-201ENST00000492033 736 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 RNA5SP75-201ENST00000516841 111 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC100784.1-201ENST00000522790 310 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 BMS1P16-201ENST00000556075 1147 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 HMGB3P26-201ENST00000560051 582 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 AC090312.1-201ENST00000580637 348 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC3.99□□□□□ -1.77
CKS1BP61024 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 AL513327.3-201ENST00000602618 469 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AP001823.1-201ENST00000604056 1003 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 uc_338.26-201ENST00000612659 160 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 AL445670.1-201ENST00000618889 801 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 AC090971.4-201ENST00000560291 1800 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 PSG10P-201ENST00000501199 1500 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms