Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC4P56524 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HDAC4P56524 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HDAC4P56524 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 RNU6-386P-201ENST00000362650 107 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 RNA5SP500-201ENST00000364486 119 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 RNA5SP433-201ENST00000364491 114 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 RN7SKP81-201ENST00000365603 331 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 OR7E156P-201ENST00000400303 464 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC4P56524 AL139039.2-201ENST00000407436 479 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.11□□□□□ -1.43
HDAC4P56524 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC007064.3-201ENST00000422608 359 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 NDUFS5P5-201ENST00000437256 321 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 PPIAP20-201ENST00000449839 135 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.11□□□□□ -1.43
HDAC4P56524 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 NPM1P52-201ENST00000518264 846 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC027026.1-201ENST00000532323 742 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HDAC4P56524 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC006530.1-201ENST00000555980 571 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 AL356801.1-201ENST00000559320 294 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 NPM1P42-201ENST00000560329 862 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC4P56524 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC4P56524 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC4P56524 AL139099.4-201ENST00000614802 114 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 AC144833.1-201ENST00000567953 4089 ntBASIC6.11□□□□□ -1.43
HDAC4P56524 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC4P56524 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 FBXL21-201ENST00000297158 1305 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 MFSD8-219ENST00000641228 2559 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HDAC4P56524 RNU1-150P-201ENST00000362491 162 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 RN7SKP78-201ENST00000364711 318 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC4P56524 AL607077.1-201ENST00000401718 499 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC4P56524 RNU6-564P-201ENST00000410983 104 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC4P56524 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.1□□□□□ -1.43
HDAC4P56524 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms