Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TAAR4P-201ENST00000454843 1039 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC025458.1-201ENST00000506046 166 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.43□□□□□ -1.54
PKNOX1P55347 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL359715.3-201ENST00000569267 2123 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.43□□□□□ -1.54
PKNOX1P55347 MIR5010-201ENST00000582846 120 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.43□□□□□ -1.54
PKNOX1P55347 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL683826.1-201ENST00000624104 627 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 MTCO1P46-201ENST00000451639 1491 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 ICE2P1-201ENST00000512800 1849 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC006484.1-201ENST00000435086 1884 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PKNOX1P55347 OR7E101P-201ENST00000400428 513 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 RNA5SP431-201ENST00000410312 120 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.42□□□□□ -1.54
PKNOX1P55347 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AL358876.1-201ENST00000453364 1075 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 CBX1P2-201ENST00000453841 458 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AC111000.5-201ENST00000506559 1178 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 AC021106.1-201ENST00000509020 1058 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 OR5H7P-201ENST00000514084 930 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 RNU6-1334P-201ENST00000516032 105 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 RNA5SP230-201ENST00000517039 122 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 AC009237.13-201ENST00000603193 276 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 AC026367.3-201ENST00000619032 590 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 uc_338.7-201ENST00000621834 124 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 FRG1EP-201ENST00000634469 770 ntBASIC5.42□□□□□ -1.54
PKNOX1P55347 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.42□□□□□ -1.54
PKNOX1P55347 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.42□□□□□ -1.54
PKNOX1P55347 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKNOX1P55347 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
PKNOX1P55347 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 LINC01963-201ENST00000562038 3148 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 TMSB4XP2-201ENST00000335179 210 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 SNORA64.1-201ENST00000362600 132 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 SUGT1P2-201ENST00000379452 992 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKNOX1P55347 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.41□□□□□ -1.54
PKNOX1P55347 AC104339.1-201ENST00000465478 348 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 UBFD1P1-201ENST00000473259 814 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 RPL9P15-201ENST00000491096 532 ntBASIC5.41□□□□□ -1.54
PKNOX1P55347 RPS26P24-201ENST00000497656 331 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms