Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.69□□□□□ -1.18
CLTCL1P53675 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.69□□□□□ -1.18
CLTCL1P53675 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.69□□□□□ -1.18
CLTCL1P53675 AC108161.1-201ENST00000461060 402 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 AC091912.1-201ENST00000511351 248 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 RN7SKP147-201ENST00000517154 244 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 AC011447.4-201ENST00000587562 111 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.69□□□□□ -1.18
CLTCL1P53675 AC100827.5-201ENST00000615883 426 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 AC131971.1-201ENST00000332881 1482 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.68□□□□□ -1.18
CLTCL1P53675 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
CLTCL1P53675 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.68□□□□□ -1.18
CLTCL1P53675 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CLTCL1P53675 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 AC009127.1-201ENST00000467090 155 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 GTF2F2P1-201ENST00000511083 675 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 RN7SKP248-201ENST00000516278 305 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.68□□□□□ -1.18
CLTCL1P53675 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.68□□□□□ -1.18
CLTCL1P53675 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.68□□□□□ -1.18
CLTCL1P53675 AC008814.1-201ENST00000603797 406 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7.68□□□□□ -1.18
CLTCL1P53675 AC015660.5-201ENST00000623238 564 ntBASIC7.68□□□□□ -1.18
CLTCL1P53675 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CLTCL1P53675 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CLTCL1P53675 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.68□□□□□ -1.18
CLTCL1P53675 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.68□□□□□ -1.18
CLTCL1P53675 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
CLTCL1P53675 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLTCL1P53675 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 RPL12P17-201ENST00000432393 498 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.67□□□□□ -1.18
CLTCL1P53675 RNA5SP228-201ENST00000516232 133 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 SUMO2P19-201ENST00000518920 295 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.67□□□□□ -1.18
CLTCL1P53675 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.67□□□□□ -1.18
CLTCL1P53675 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.67□□□□□ -1.18
CLTCL1P53675 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.67□□□□□ -1.18
CLTCL1P53675 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CLTCL1P53675 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
CLTCL1P53675 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC073342.2-201ENST00000595842 1800 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.67□□□□□ -1.18
CLTCL1P53675 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.67□□□□□ -1.18
CLTCL1P53675 LINC02035-201ENST00000610128 5476 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
CLTCL1P53675 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CLTCL1P53675 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 U3.28-201ENST00000391249 210 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 AC104837.2-201ENST00000427236 424 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 BX679664.2-201ENST00000439282 283 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.67□□□□□ -1.18
CLTCL1P53675 SCARNA20.4-201ENST00000516969 131 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.67□□□□□ -1.18
CLTCL1P53675 AC108738.1-201ENST00000603703 237 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 AC093799.2-201ENST00000610062 578 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 AC244107.2-201ENST00000611773 76 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 MIR7703-201ENST00000620784 77 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 AC074101.1-201ENST00000637861 241 ntBASIC7.67□□□□□ -1.18
CLTCL1P53675 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLTCL1P53675 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.66□□□□□ -1.18
CLTCL1P53675 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLTCL1P53675 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLTCL1P53675 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CLTCL1P53675 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLTCL1P53675 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CLTCL1P53675 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLTCL1P53675 AC107980.1-201ENST00000558671 3355 ntBASIC7.66□□□□□ -1.18
CLTCL1P53675 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CLTCL1P53675 INTS6P1-201ENST00000504674 2530 ntBASIC7.66□□□□□ -1.18
CLTCL1P53675 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLTCL1P53675 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms