Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 AC095055.1-201ENST00000603472 1113 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 AC010435.1-201ENST00000623353 1177 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AL353662.3-201ENST00000625131 237 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CXCL12P48061 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CXCL12P48061 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CXCL12P48061 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 RNU4-4P-201ENST00000364588 130 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 RNU1-149P-201ENST00000390870 161 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 AL133388.1-201ENST00000404509 287 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.56□□□□□ -1.52
CXCL12P48061 AL049745.1-201ENST00000433953 286 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 AC092106.1-201ENST00000444291 373 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 AC006463.2-201ENST00000473326 348 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 AC079080.1-201ENST00000479841 822 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.56□□□□□ -1.52
CXCL12P48061 AC083982.1-201ENST00000485679 344 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 RNU6-941P-201ENST00000516346 108 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 SCARNA16.4-201ENST00000516956 187 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 BRD9P1-201ENST00000529855 560 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CXCL12P48061 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.56□□□□□ -1.52
CXCL12P48061 AL049779.3-201ENST00000557141 606 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CXCL12P48061 RBM22P1-201ENST00000578589 1214 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.56□□□□□ -1.52
CXCL12P48061 FAM25E-202ENST00000608562 189 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 MIR6810-201ENST00000622701 70 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 MFSD8-239ENST00000641590 2479 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 RAD17P2-201ENST00000451754 1977 ntBASIC5.56□□□□□ -1.52
CXCL12P48061 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.56□□□□□ -1.52
CXCL12P48061 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
CXCL12P48061 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
CXCL12P48061 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXCL12P48061 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 AL162456.1-201ENST00000634535 2006 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CXCL12P48061 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 FAR2P2-201ENST00000413041 594 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 FAR2P4-202ENST00000425399 584 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 PRUNEP1-201ENST00000425846 705 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.55□□□□□ -1.52
CXCL12P48061 RBMY2QP-201ENST00000429799 1147 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.55□□□□□ -1.52
CXCL12P48061 OSTCP1-201ENST00000455507 450 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 FTH1P2-201ENST00000466086 412 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC110775.1-201ENST00000513721 462 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 GSTP1P1-201ENST00000548078 319 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.55□□□□□ -1.52
CXCL12P48061 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC005084.1-201ENST00000605160 304 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC109583.2-201ENST00000617367 129 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC004836.1-201ENST00000623032 634 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 AC091953.3-201ENST00000623220 236 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CXCL12P48061 AC119674.1-217ENST00000641942 1086 ntBASIC5.55□□□□□ -1.52
CXCL12P48061 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.55□□□□□ -1.52
CXCL12P48061 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXCL12P48061 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms