Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.54□□□□□ -1.36
SCN4AP35499 AC020910.2-201ENST00000603635 610 ntBASIC6.54□□□□□ -1.36
SCN4AP35499 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SCN4AP35499 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN4AP35499 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.54□□□□□ -1.36
SCN4AP35499 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
SCN4AP35499 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SCN4AP35499 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SCN4AP35499 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.54□□□□□ -1.36
SCN4AP35499 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 AL353625.1-202ENST00000366273 571 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 GAPDHP15-201ENST00000398586 975 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 NDUFA12P1-201ENST00000455914 406 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 AC020898.1-201ENST00000474167 787 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
SCN4AP35499 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN4AP35499 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 THAP12P4-201ENST00000528321 2266 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN4AP35499 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SCN4AP35499 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN4AP35499 SNORA62-201ENST00000365493 153 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN4AP35499 AC016027.5-201ENST00000427227 210 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN4AP35499 HPRT1P1-201ENST00000509498 657 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN4AP35499 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN4AP35499 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN4AP35499 AP000919.1-201ENST00000582850 985 ntBASIC6.53□□□□□ -1.36
SCN4AP35499 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 MT-RNR2-201ENST00000387347 1559 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCN4AP35499 AL078599.1-201ENST00000402075 293 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 MGAT2P2-201ENST00000427194 797 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 MTCYBP21-201ENST00000443300 1113 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 AL451063.1-201ENST00000450164 1133 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 MEMO1P4-201ENST00000453590 386 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN4AP35499 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 OR4A6P-201ENST00000534364 970 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN4AP35499 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.52□□□□□ -1.37
SCN4AP35499 AL163952.1-202ENST00000569625 600 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN4AP35499 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
SCN4AP35499 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 AP000547.3-204ENST00000588548 2523 ntBASIC6.52□□□□□ -1.37
SCN4AP35499 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN4AP35499 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN4AP35499 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SCN4AP35499 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SCN4AP35499 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 492.5 ms