Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXD13P35453 PTP4A1P1-201ENST00000420539 515 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 AC006335.2-201ENST00000437993 330 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 RPS10P18-201ENST00000442662 495 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AL596266.1-201ENST00000448132 400 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AC009963.4-201ENST00000448535 339 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 NDUFA5P8-201ENST00000449019 346 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AL445665.1-202ENST00000452436 324 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AC144530.1-201ENST00000452862 555 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 AC098583.1-201ENST00000480875 255 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 RN7SL284P-201ENST00000498823 275 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD13P35453 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXD13P35453 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 AP000550.3-201ENST00000637734 379 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 MIR193BHG-214ENST00000641765 509 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC003985.2-201ENST00000562268 1669 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXD13P35453 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HOXD13P35453 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 MIR1282-201ENST00000408865 101 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD13P35453 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 MTND6P12-201ENST00000428247 522 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 KCTD9P1-201ENST00000430462 1167 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXD13P35453 MTCO1P57-201ENST00000432182 261 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 MEMO1P4-201ENST00000453590 386 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 MTND6P32-201ENST00000457611 483 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 AC007998.1-201ENST00000474156 672 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 RNU6-362P-201ENST00000516736 90 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD13P35453 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD13P35453 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD13P35453 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXD13P35453 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD13P35453 AL353729.2-201ENST00000605859 1249 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 AC067838.1-201ENST00000606064 577 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 MIR6778-201ENST00000617912 73 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD13P35453 AC104820.1-201ENST00000624183 307 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXD13P35453 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 AL355488.2-201ENST00000609909 2850 ntBASIC6.19□□□□□ -1.42
HOXD13P35453 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD13P35453 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD13P35453 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms