Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC007012.2-201ENST00000623206 1676 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXC12P31275 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXC12P31275 AC006116.1-201ENST00000587908 2171 ntBASIC6.33□□□□□ -1.4
HOXC12P31275 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
HOXC12P31275 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 AP000547.3-204ENST00000588548 2523 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC093297.3-201ENST00000607056 2517 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXC12P31275 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 AL355852.1-201ENST00000454081 1771 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXC12P31275 OR1L1-202ENST00000373686 1083 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXC12P31275 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 OR8V1P-201ENST00000395193 873 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 RNA5SP498-201ENST00000411342 120 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 NRBF2P2-201ENST00000413087 861 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 P2RY10P2-201ENST00000416730 913 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC007435.1-201ENST00000421086 415 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 PRUNEP1-201ENST00000425846 705 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RPL23AP4-201ENST00000427757 463 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 CDY14P-201ENST00000431260 1014 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 DBIL5P2-201ENST00000443827 253 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 HMGB1P16-201ENST00000447155 540 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 CDY23P-201ENST00000451661 1014 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXC12P31275 SRP68P2-201ENST00000456184 254 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC019084.1-201ENST00000457337 432 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RPS16P9-201ENST00000477220 427 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RN7SL849P-201ENST00000485236 295 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 PPP1R11P1-201ENST00000486095 376 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC066616.1-201ENST00000486795 413 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC069304.1-201ENST00000491593 704 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RN7SL569P-201ENST00000494652 288 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RPS6P4-201ENST00000494693 758 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 WBP1LP4-201ENST00000505043 344 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC073358.1-201ENST00000505671 684 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC005178.1-201ENST00000508392 440 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 PGAM4P2-201ENST00000512491 721 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 RNA5SP116-201ENST00000516132 98 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 SCARNA18.2-201ENST00000516882 84 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 NDUFA5P2-201ENST00000519723 344 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXC12P31275 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 NDUFA3P4-201ENST00000560814 250 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC012435.1-202ENST00000568772 240 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 MIR4470-201ENST00000583453 72 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 SS18L2P2-201ENST00000583960 235 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 AC073544.2-201ENST00000601155 540 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXC12P31275 OR7E161P-202ENST00000641994 1033 ntBASIC6.32□□□□□ -1.4
HOXC12P31275 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXC12P31275 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXC12P31275 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXC12P31275 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms