Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
HOXC8P31273 AC072052.1-201ENST00000496556 306 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 RPEP1-201ENST00000504507 658 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC8P31273 HNRNPRP2-201ENST00000528421 743 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AC078878.1-201ENST00000539832 958 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC8P31273 AC018558.5-201ENST00000565840 952 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AC023389.2-201ENST00000580031 955 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL583832.1-201ENST00000603227 784 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL139407.1-201ENST00000613826 1175 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
HOXC8P31273 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 AC093909.5-201ENST00000621839 1799 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC8P31273 MTCO1P22-201ENST00000604619 1360 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC8P31273 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXC8P31273 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXC8P31273 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXC8P31273 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HOXC8P31273 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXC8P31273 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 AC005294.1-201ENST00000355509 281 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 RNU1-77P-201ENST00000390868 162 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC8P31273 RPS20P25-201ENST00000412447 352 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXC8P31273 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 RPL23AP27-201ENST00000415161 451 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 AC005033.1-201ENST00000428904 813 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 AL596266.1-201ENST00000448132 400 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 OR7L1P-201ENST00000456181 380 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 RN7SL610P-201ENST00000463845 291 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AC079080.1-201ENST00000479841 822 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXC8P31273 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC8P31273 AC004825.1-201ENST00000555068 586 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 AC004948.1-201ENST00000609858 672 ntBASIC6.17□□□□□ -1.42
HOXC8P31273 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC8P31273 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXC8P31273 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC8P31273 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HOXC8P31273 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
HOXC8P31273 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC8P31273 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC8P31273 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC8P31273 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 OLMALINC-203ENST00000641087 3779 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 SNORA74A-201ENST00000364089 198 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 RN7SKP6-201ENST00000364795 319 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC007068.1-201ENST00000396690 844 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 CASKP1-201ENST00000412870 582 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC007161.1-204ENST00000423039 460 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC8P31273 CYCSP6-201ENST00000434498 302 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC073410.1-201ENST00000435125 589 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC092106.1-201ENST00000444291 373 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC8P31273 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 RN7SL826P-201ENST00000479724 288 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC016687.1-201ENST00000482574 353 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 MORF4L2P1-201ENST00000503761 858 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 snoU109.5-201ENST00000516231 132 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HOXC8P31273 OR10G5P-201ENST00000532733 358 ntBASIC6.16□□□□□ -1.42
HOXC8P31273 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC8P31273 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC8P31273 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC8P31273 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms