Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 RN7SKP6-201ENST00000364795 319 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 RN7SKP186-201ENST00000365371 303 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 MIR551A-201ENST00000385042 96 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC009804.1-201ENST00000400949 179 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC096921.1-201ENST00000411661 375 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 RPL35AP24-201ENST00000413846 330 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 AL606490.1-201ENST00000452266 765 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 RPL12P39-201ENST00000455456 496 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC093815.1-201ENST00000508637 280 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.71□□□□□ -1.66
COL8A2P25067 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 OR5D2P-201ENST00000524390 911 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.71□□□□□ -1.66
COL8A2P25067 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 AC139697.1-201ENST00000548429 745 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 NPM1P42-201ENST00000560329 862 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.71□□□□□ -1.66
COL8A2P25067 MIR4311-201ENST00000580794 100 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC007448.1-201ENST00000582714 234 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.71□□□□□ -1.66
COL8A2P25067 FKBP1AP1-201ENST00000594588 318 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.71□□□□□ -1.66
COL8A2P25067 AC125494.2-201ENST00000602431 657 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 HIRAP1-201ENST00000605318 787 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 PPATP2-201ENST00000605635 508 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 AC025574.2-201ENST00000615621 514 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
COL8A2P25067 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.71□□□□□ -1.66
COL8A2P25067 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COL8A2P25067 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL8A2P25067 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.7□□□□□ -1.66
COL8A2P25067 AL161912.4-201ENST00000623889 2468 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 RNA5SP234-201ENST00000363916 119 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 RN7SKP278-201ENST00000410504 342 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 Z93019.1-201ENST00000416450 973 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 AC073410.1-201ENST00000435125 589 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.7□□□□□ -1.66
COL8A2P25067 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.7□□□□□ -1.66
COL8A2P25067 OR2AO1P-201ENST00000476497 403 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 UBA52P7-201ENST00000486088 380 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 AC021146.10-201ENST00000515628 706 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.7□□□□□ -1.66
COL8A2P25067 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.7□□□□□ -1.66
COL8A2P25067 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.7□□□□□ -1.66
COL8A2P25067 AC012616.1-201ENST00000600294 197 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.7□□□□□ -1.66
COL8A2P25067 AC093388.1-201ENST00000609166 430 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.7□□□□□ -1.66
COL8A2P25067 AP000550.3-201ENST00000637734 379 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 AL162456.1-201ENST00000634535 2006 ntBASIC4.7□□□□□ -1.66
COL8A2P25067 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.7□□□□□ -1.66
COL8A2P25067 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL8A2P25067 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL8A2P25067 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.69□□□□□ -1.66
COL8A2P25067 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC068870.1-201ENST00000563737 2455 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 OR9K1P-201ENST00000326513 941 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms