Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AC073109.1-201ENST00000445066 978 ntBASIC6.32□□□□□ -1.4
BDNFP23560 RSL24D1P2-201ENST00000445584 366 ntBASIC6.32□□□□□ -1.4
BDNFP23560 CASP3P1-201ENST00000446037 609 ntBASIC6.32□□□□□ -1.4
BDNFP23560 RPL10P17-201ENST00000453852 316 ntBASIC6.32□□□□□ -1.4
BDNFP23560 RPL7L1P3-201ENST00000455249 689 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC104164.1-201ENST00000460282 590 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC124945.1-201ENST00000485133 188 ntBASIC6.32□□□□□ -1.4
BDNFP23560 RPL17P2-201ENST00000491913 451 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AC108157.1-201ENST00000510511 539 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.32□□□□□ -1.4
BDNFP23560 PCNAP4-201ENST00000532690 730 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.32□□□□□ -1.4
BDNFP23560 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.32□□□□□ -1.4
BDNFP23560 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.32□□□□□ -1.4
BDNFP23560 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.32□□□□□ -1.4
BDNFP23560 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 AC010487.1-201ENST00000594408 1172 ntBASIC6.32□□□□□ -1.4
BDNFP23560 MIMT1-201ENST00000597105 1050 ntBASIC6.32□□□□□ -1.4
BDNFP23560 AC005229.3-201ENST00000603438 323 ntBASIC6.32□□□□□ -1.4
BDNFP23560 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.32□□□□□ -1.4
BDNFP23560 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BDNFP23560 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.32□□□□□ -1.4
BDNFP23560 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.32□□□□□ -1.4
BDNFP23560 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BDNFP23560 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
BDNFP23560 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 AC007382.1-201ENST00000624376 2618 ntBASIC6.31□□□□□ -1.4
BDNFP23560 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.31□□□□□ -1.4
BDNFP23560 AL731532.1-201ENST00000623972 4236 ntBASIC6.31□□□□□ -1.4
BDNFP23560 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BDNFP23560 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.31□□□□□ -1.4
BDNFP23560 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BDNFP23560 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 RN7SKP128-201ENST00000364270 303 ntBASIC6.31□□□□□ -1.4
BDNFP23560 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BDNFP23560 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.31□□□□□ -1.4
BDNFP23560 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.31□□□□□ -1.4
BDNFP23560 RPA2P2-201ENST00000419698 796 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.31□□□□□ -1.4
BDNFP23560 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.31□□□□□ -1.4
BDNFP23560 AL445928.1-201ENST00000435545 222 ntBASIC6.31□□□□□ -1.4
BDNFP23560 RPS7P3-201ENST00000443360 580 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AC099063.2-201ENST00000446360 662 ntBASIC6.31□□□□□ -1.4
BDNFP23560 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.31□□□□□ -1.4
BDNFP23560 AC243772.1-201ENST00000451620 410 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AC016724.1-201ENST00000453215 421 ntBASIC6.31□□□□□ -1.4
BDNFP23560 SDC4P-201ENST00000453285 601 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AL122020.1-201ENST00000472287 459 ntBASIC6.31□□□□□ -1.4
BDNFP23560 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.31□□□□□ -1.4
BDNFP23560 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.31□□□□□ -1.4
BDNFP23560 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.31□□□□□ -1.4
BDNFP23560 AC006530.1-201ENST00000555980 571 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.31□□□□□ -1.4
BDNFP23560 AC007494.1-201ENST00000562293 760 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AGGF1P7-201ENST00000562369 913 ntBASIC6.31□□□□□ -1.4
BDNFP23560 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.31□□□□□ -1.4
BDNFP23560 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.31□□□□□ -1.4
BDNFP23560 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.31□□□□□ -1.4
BDNFP23560 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
BDNFP23560 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BDNFP23560 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.31□□□□□ -1.4
BDNFP23560 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.3□□□□□ -1.4
BDNFP23560 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.3□□□□□ -1.4
BDNFP23560 BX005019.1-201ENST00000561881 1810 ntBASIC6.3□□□□□ -1.4
BDNFP23560 AC092079.1-201ENST00000558620 1985 ntBASIC6.3□□□□□ -1.4
BDNFP23560 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 RNU1-150P-201ENST00000362491 162 ntBASIC6.3□□□□□ -1.4
BDNFP23560 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BDNFP23560 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BDNFP23560 NCSTNP1-201ENST00000406229 144 ntBASIC6.3□□□□□ -1.4
BDNFP23560 RN7SKP166-201ENST00000410812 305 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms