Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 AC146944.3-201ENST00000509969 371 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.89□□□□□ -1.15
RFX1P22670 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.89□□□□□ -1.15
RFX1P22670 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 AC015801.1-201ENST00000585651 153 ntBASIC7.89□□□□□ -1.15
RFX1P22670 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.89□□□□□ -1.15
RFX1P22670 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 MTCYBP22-201ENST00000603788 447 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AL161931.1-201ENST00000612768 246 ntBASIC7.89□□□□□ -1.15
RFX1P22670 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.89□□□□□ -1.15
RFX1P22670 uc_338.21-201ENST00000622458 147 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC124312.6-202ENST00000623624 418 ntBASIC7.89□□□□□ -1.15
RFX1P22670 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 Y_RNA.41-201ENST00000362646 102 ntBASIC7.88□□□□□ -1.15
RFX1P22670 MIR551B-201ENST00000384984 96 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 RN7SKP108-201ENST00000411367 328 ntBASIC7.88□□□□□ -1.15
RFX1P22670 OR51A3P-201ENST00000413596 924 ntBASIC7.88□□□□□ -1.15
RFX1P22670 GSTA6P-201ENST00000424144 582 ntBASIC7.88□□□□□ -1.15
RFX1P22670 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 ZNF114P1-201ENST00000453500 292 ntBASIC7.88□□□□□ -1.15
RFX1P22670 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 RNA5SP269-201ENST00000459032 137 ntBASIC7.88□□□□□ -1.15
RFX1P22670 RPS4XP12-201ENST00000461747 709 ntBASIC7.88□□□□□ -1.15
RFX1P22670 OR9A1P-202ENST00000484361 945 ntBASIC7.88□□□□□ -1.15
RFX1P22670 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
RFX1P22670 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 AC006499.5-201ENST00000505037 514 ntBASIC7.88□□□□□ -1.15
RFX1P22670 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AC130366.1-201ENST00000526505 1192 ntBASIC7.88□□□□□ -1.15
RFX1P22670 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 AC068631.3-201ENST00000538831 225 ntBASIC7.88□□□□□ -1.15
RFX1P22670 OR7K1P-201ENST00000546439 926 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 AC089984.3-201ENST00000552838 363 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AL133241.1-201ENST00000556832 487 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.88□□□□□ -1.15
RFX1P22670 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.88□□□□□ -1.15
RFX1P22670 AC234778.2-201ENST00000566241 354 ntBASIC7.88□□□□□ -1.15
RFX1P22670 RN7SL366P-201ENST00000577957 292 ntBASIC7.88□□□□□ -1.15
RFX1P22670 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 MIR378H-201ENST00000579966 83 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 AC133552.5-201ENST00000604266 540 ntBASIC7.88□□□□□ -1.15
RFX1P22670 NDUFA8P1-201ENST00000605525 367 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.88□□□□□ -1.15
RFX1P22670 AC005840.5-201ENST00000619166 599 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC025287.2-201ENST00000621911 668 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC073348.1-201ENST00000623002 331 ntBASIC7.88□□□□□ -1.15
RFX1P22670 AC073488.7-201ENST00000633785 778 ntBASIC7.88□□□□□ -1.15
RFX1P22670 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.88□□□□□ -1.15
RFX1P22670 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RFX1P22670 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RFX1P22670 SAMMSON-209ENST00000641222 1100 ntBASIC7.88□□□□□ -1.15
RFX1P22670 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.88□□□□□ -1.15
RFX1P22670 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RFX1P22670 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms