Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC079203.1-201ENST00000487972 404 ntBASIC7.57□□□□□ -1.2
LIG1P18858 OR2A3P-201ENST00000493774 953 ntBASIC7.57□□□□□ -1.2
LIG1P18858 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.57□□□□□ -1.2
LIG1P18858 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.57□□□□□ -1.2
LIG1P18858 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.57□□□□□ -1.2
LIG1P18858 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.57□□□□□ -1.2
LIG1P18858 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.57□□□□□ -1.2
LIG1P18858 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LIG1P18858 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC7.57□□□□□ -1.2
LIG1P18858 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.57□□□□□ -1.2
LIG1P18858 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.57□□□□□ -1.2
LIG1P18858 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.57□□□□□ -1.2
LIG1P18858 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
LIG1P18858 AL590229.1-201ENST00000603497 542 ntBASIC7.57□□□□□ -1.2
LIG1P18858 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
LIG1P18858 AL450489.1-201ENST00000612071 468 ntBASIC7.57□□□□□ -1.2
LIG1P18858 Z69908.1-201ENST00000622603 247 ntBASIC7.57□□□□□ -1.2
LIG1P18858 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.57□□□□□ -1.2
LIG1P18858 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.57□□□□□ -1.2
LIG1P18858 AC095038.1-201ENST00000429248 1591 ntBASIC7.57□□□□□ -1.2
LIG1P18858 AL022323.4-201ENST00000623980 13120 ntBASIC7.57□□□□□ -1.2
LIG1P18858 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LIG1P18858 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LIG1P18858 AL442128.2-201ENST00000620246 1824 ntBASIC7.57□□□□□ -1.2
LIG1P18858 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.57□□□□□ -1.2
LIG1P18858 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.57□□□□□ -1.2
LIG1P18858 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LIG1P18858 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
LIG1P18858 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 AL049737.1-201ENST00000413920 1403 ntBASIC7.56□□□□□ -1.2
LIG1P18858 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 RNA5SP188-201ENST00000362916 129 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RNU5B-1-201ENST00000363286 116 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RNU6-304P-201ENST00000364855 107 ntBASIC7.56□□□□□ -1.2
LIG1P18858 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LIG1P18858 RNU1-46P-201ENST00000384425 164 ntBASIC7.56□□□□□ -1.2
LIG1P18858 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 RNA5SP115-201ENST00000411160 107 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 PTP4A1P5-201ENST00000420305 455 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC006509.1-201ENST00000420788 634 ntBASIC7.56□□□□□ -1.2
LIG1P18858 MTCYBP5-201ENST00000423752 1135 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 AC000041.1-201ENST00000439655 175 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AL845321.1-201ENST00000444603 348 ntBASIC7.56□□□□□ -1.2
LIG1P18858 PTENP1-201ENST00000447117 1215 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RPL7AP71-201ENST00000451120 739 ntBASIC7.56□□□□□ -1.2
LIG1P18858 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.56□□□□□ -1.2
LIG1P18858 AC022080.2-201ENST00000452932 533 ntBASIC7.56□□□□□ -1.2
LIG1P18858 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 AL133477.1-201ENST00000457472 514 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RPSAP24-201ENST00000461543 873 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RN7SL790P-201ENST00000474043 298 ntBASIC7.56□□□□□ -1.2
LIG1P18858 RN7SL654P-201ENST00000479178 292 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC004815.1-201ENST00000484185 331 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC009567.2-201ENST00000502989 349 ntBASIC7.56□□□□□ -1.2
LIG1P18858 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.56□□□□□ -1.2
LIG1P18858 SNX18P23-201ENST00000510867 677 ntBASIC7.56□□□□□ -1.2
LIG1P18858 FABP5P12-201ENST00000515543 389 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AP005902.2-201ENST00000518393 307 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AP003080.1-202ENST00000526526 915 ntBASIC7.56□□□□□ -1.2
LIG1P18858 MTND4LP18-201ENST00000526864 291 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 AC106734.1-201ENST00000568646 663 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.56□□□□□ -1.2
LIG1P18858 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 AL590032.1-201ENST00000604920 252 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC024589.2-201ENST00000605642 1294 ntBASIC7.56□□□□□ -1.2
LIG1P18858 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 AC116165.2-201ENST00000616705 206 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC010975.3-201ENST00000618727 978 ntBASIC7.56□□□□□ -1.2
LIG1P18858 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 AP003072.4-201ENST00000624580 310 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC091965.5-201ENST00000624785 342 ntBASIC7.56□□□□□ -1.2
LIG1P18858 AC019226.1-201ENST00000625666 515 ntBASIC7.56□□□□□ -1.2
LIG1P18858 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 AC110373.1-201ENST00000505994 3505 ntBASIC7.56□□□□□ -1.2
LIG1P18858 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LIG1P18858 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 KARSP3-201ENST00000571212 1504 ntBASIC7.56□□□□□ -1.2
LIG1P18858 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LIG1P18858 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.56□□□□□ -1.2
LIG1P18858 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.55□□□□□ -1.2
LIG1P18858 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LIG1P18858 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms