Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOBP13765 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOBP13765 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOBP13765 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOBP13765 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DOBP13765 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.19□□□□□ -1.58
HLA-DOBP13765 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DOBP13765 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DOBP13765 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DOBP13765 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC092070.2-203ENST00000598377 3644 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 RNU6-925P-201ENST00000384629 104 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 RNA5SP91-201ENST00000390902 119 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AL356057.1-202ENST00000402263 756 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC098592.2-201ENST00000413158 265 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC066692.1-201ENST00000421721 457 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 RNF19BPX-201ENST00000426224 625 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC115283.1-201ENST00000427353 400 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 PCBP2P1-201ENST00000437262 977 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AL122020.1-201ENST00000472287 459 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC099521.1-201ENST00000482557 334 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC092902.1-201ENST00000486999 259 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC093763.2-201ENST00000505334 1223 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC068305.2-201ENST00000550567 1205 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 BNIP3P40-201ENST00000596017 556 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 MIMT1-201ENST00000597105 1050 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC005776.1-201ENST00000603164 290 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC135178.6-201ENST00000605314 398 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 MIR6071-201ENST00000616741 78 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC025262.3-201ENST00000623666 360 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AP003499.2-201ENST00000624100 483 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC110792.3-201ENST00000595906 1614 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DOBP13765 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 HSPA8P19-201ENST00000505359 1517 ntBASIC5.18□□□□□ -1.58
HLA-DOBP13765 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DOBP13765 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOBP13765 PDZK1P1-202ENST00000425209 1350 ntBASIC5.17□□□□□ -1.58
HLA-DOBP13765 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DOBP13765 AC239868.2-201ENST00000564237 4527 ntBASIC5.17□□□□□ -1.58
HLA-DOBP13765 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DOBP13765 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOBP13765 AC009135.2-201ENST00000624136 1768 ntBASIC5.17□□□□□ -1.58
HLA-DOBP13765 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DOBP13765 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DOBP13765 MIR365B-201ENST00000362317 111 ntBASIC5.17□□□□□ -1.58
HLA-DOBP13765 U3.10-201ENST00000364459 214 ntBASIC5.17□□□□□ -1.58
HLA-DOBP13765 RN7SKP275-201ENST00000364626 301 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms