Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC097478.2-201ENST00000610572 514 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC018659.2-201ENST00000624690 715 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 AC104162.1-201ENST00000430831 2382 ntBASIC6.81□□□□□ -1.32
HLA-DOAP06340 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-DOAP06340 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HLA-DOAP06340 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HLA-DOAP06340 WBP11P1-201ENST00000562560 1931 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC007618.1-201ENST00000366455 732 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HLA-DOAP06340 RNU6-883P-201ENST00000384597 107 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 NIFKP3-201ENST00000417799 865 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 MTND4LP7-201ENST00000431728 294 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC096775.1-201ENST00000437724 448 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 LDHBP2-201ENST00000456969 1005 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC004129.2-201ENST00000457229 287 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC110749.1-201ENST00000462007 357 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC079080.1-201ENST00000479841 822 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC006539.1-201ENST00000481419 501 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC108693.1-201ENST00000496068 432 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC105384.2-201ENST00000508433 640 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 NPM1P45-201ENST00000583151 559 ntBASIC6.8□□□□□ -1.32
HLA-DOAP06340 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HLA-DOAP06340 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HLA-DOAP06340 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HLA-DOAP06340 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.8□□□□□ -1.32
HLA-DOAP06340 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 SNORD1C-201ENST00000363315 78 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 RNA5SP131-201ENST00000365452 119 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AL121835.1-201ENST00000404250 354 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 SPRYD7P1-201ENST00000443861 570 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 NPM1P19-201ENST00000450070 712 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 OSTCP1-201ENST00000455507 450 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC068587.2-201ENST00000478386 781 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC073610.1-201ENST00000489971 396 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 BX510359.5-201ENST00000515651 304 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 LINC00557-201ENST00000563184 1279 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC018645.2-201ENST00000609151 472 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 AC010608.3-201ENST00000625048 527 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 OR4G3P-201ENST00000633500 913 ntBASIC6.79□□□□□ -1.32
HLA-DOAP06340 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-DOAP06340 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-DOAP06340 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-DOAP06340 AC089998.1-201ENST00000548575 3141 ntBASIC6.78□□□□□ -1.32
HLA-DOAP06340 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-DOAP06340 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms