Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.82□□□□□ -1.48
PDGFBP01127 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 AC011493.1-201ENST00000596753 1632 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFBP01127 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 PROS2P-201ENST00000474651 1951 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 RNU4-2-201ENST00000365668 141 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 PTCD2P2-201ENST00000415579 1095 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFBP01127 AL360081.1-201ENST00000428299 555 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC112187.1-201ENST00000455837 479 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 IGLV2-34-201ENST00000490007 283 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC109462.1-201ENST00000491087 368 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFBP01127 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFBP01127 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFBP01127 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.81□□□□□ -1.48
PDGFBP01127 TAS2R6P-201ENST00000605022 826 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC087783.2-201ENST00000605070 562 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC009704.2-201ENST00000618739 483 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFBP01127 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFBP01127 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFBP01127 AC012618.3-205ENST00000637896 1496 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 HSPA8P18-201ENST00000439846 1928 ntBASIC5.81□□□□□ -1.48
PDGFBP01127 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFBP01127 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFBP01127 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PDGFBP01127 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFBP01127 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDGFBP01127 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 TNPO1P2-201ENST00000426249 2665 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDGFBP01127 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDGFBP01127 RNA5SP335-201ENST00000363817 110 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC013442.1-201ENST00000397347 228 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 AC097721.1-201ENST00000427150 1253 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC104837.2-201ENST00000427236 424 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 RBMY2QP-201ENST00000429799 1147 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 AL663074.2-201ENST00000440621 479 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.8□□□□□ -1.48
PDGFBP01127 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 RNU4-18P-201ENST00000516751 149 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 TPM3P3-201ENST00000521343 354 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFBP01127 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 MTND2P17-201ENST00000550281 688 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 HSPE1P2-201ENST00000554777 306 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 RPL10P14-201ENST00000565265 298 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFBP01127 VN1R81P-201ENST00000602085 372 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 QTRT1P1-201ENST00000604344 1078 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 LINC01739-205ENST00000641890 573 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 AC016583.1-201ENST00000624221 2431 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFBP01127 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFBP01127 ZNF733P-202ENST00000444809 1573 ntBASIC5.8□□□□□ -1.48
PDGFBP01127 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDGFBP01127 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFBP01127 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms