Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 AC091390.2-201ENST00000432573 374 ntBASIC2.35□□□□□ -2.03
USH2AO75445 GAPDHP25-201ENST00000447061 1001 ntBASIC2.35□□□□□ -2.03
USH2AO75445 NUTF2P3-201ENST00000448540 384 ntBASIC2.35□□□□□ -2.03
USH2AO75445 snoU13.29-201ENST00000459370 104 ntBASIC2.35□□□□□ -2.03
USH2AO75445 HNRNPRP2-201ENST00000528421 743 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AL513327.3-201ENST00000602618 469 ntBASIC2.35□□□□□ -2.03
USH2AO75445 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 AF186996.5-201ENST00000418098 904 ntBASIC2.34□□□□□ -2.03
USH2AO75445 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC2.34□□□□□ -2.03
USH2AO75445 AC073143.1-201ENST00000436316 395 ntBASIC2.34□□□□□ -2.03
USH2AO75445 AL356390.1-201ENST00000455684 397 ntBASIC2.34□□□□□ -2.03
USH2AO75445 AL160281.1-201ENST00000605307 311 ntBASIC2.34□□□□□ -2.03
USH2AO75445 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USH2AO75445 AC012254.5-201ENST00000623573 478 ntBASIC2.34□□□□□ -2.03
USH2AO75445 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC2.34□□□□□ -2.03
USH2AO75445 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 ERG-205ENST00000398910 4954 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC2.34□□□□□ -2.03
USH2AO75445 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC2.34□□□□□ -2.03
USH2AO75445 SNORA70C-201ENST00000384538 135 ntBASIC2.34□□□□□ -2.03
USH2AO75445 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USH2AO75445 RNA5SP372-201ENST00000390836 115 ntBASIC2.34□□□□□ -2.03
USH2AO75445 ATP5F1P2-201ENST00000398143 760 ntBASIC2.34□□□□□ -2.03
USH2AO75445 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.34□□□□□ -2.03
USH2AO75445 RPL34P6-201ENST00000432390 345 ntBASIC2.34□□□□□ -2.03
USH2AO75445 GSTM5P1-201ENST00000434751 660 ntBASIC2.34□□□□□ -2.03
USH2AO75445 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USH2AO75445 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC2.34□□□□□ -2.03
USH2AO75445 MRPL35P2-201ENST00000448009 511 ntBASIC2.34□□□□□ -2.03
USH2AO75445 AP000797.2-201ENST00000475768 606 ntBASIC2.34□□□□□ -2.03
USH2AO75445 AC006499.6-201ENST00000511169 607 ntBASIC2.34□□□□□ -2.03
USH2AO75445 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.34□□□□□ -2.03
USH2AO75445 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 AL445647.2-201ENST00000615170 130 ntBASIC2.34□□□□□ -2.03
USH2AO75445 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.34□□□□□ -2.03
USH2AO75445 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
USH2AO75445 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
USH2AO75445 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
USH2AO75445 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC2.34□□□□□ -2.04
USH2AO75445 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC2.34□□□□□ -2.04
USH2AO75445 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 AL121657.1-201ENST00000327215 531 ntBASIC2.34□□□□□ -2.04
USH2AO75445 SNORA70F-201ENST00000384142 135 ntBASIC2.34□□□□□ -2.04
USH2AO75445 RN7SKP284-201ENST00000411002 343 ntBASIC2.34□□□□□ -2.04
USH2AO75445 RAB9AP4-201ENST00000415230 609 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.34□□□□□ -2.04
USH2AO75445 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
USH2AO75445 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC2.34□□□□□ -2.04
USH2AO75445 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC2.34□□□□□ -2.04
USH2AO75445 AC138701.1-201ENST00000524329 714 ntBASIC2.34□□□□□ -2.04
USH2AO75445 AC007224.1-201ENST00000564410 144 ntBASIC2.34□□□□□ -2.04
USH2AO75445 MIR3939-201ENST00000582614 106 ntBASIC2.34□□□□□ -2.04
USH2AO75445 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
USH2AO75445 AL049536.1-201ENST00000625043 744 ntBASIC2.34□□□□□ -2.04
USH2AO75445 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
USH2AO75445 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USH2AO75445 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC2.34□□□□□ -2.04
USH2AO75445 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms