Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BMS1P9-201ENST00000457640 885 ntBASIC5.45□□□□□ -1.54
SNX3O60493 RN7SL72P-201ENST00000460697 269 ntBASIC5.45□□□□□ -1.54
SNX3O60493 RN7SL273P-201ENST00000481561 299 ntBASIC5.45□□□□□ -1.54
SNX3O60493 RPS12P31-201ENST00000491419 398 ntBASIC5.45□□□□□ -1.54
SNX3O60493 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX3O60493 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX3O60493 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 AC006349.1-201ENST00000555526 235 ntBASIC5.45□□□□□ -1.54
SNX3O60493 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX3O60493 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 AC063977.7-201ENST00000594454 337 ntBASIC5.45□□□□□ -1.54
SNX3O60493 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 AC020915.5-201ENST00000596836 964 ntBASIC5.45□□□□□ -1.54
SNX3O60493 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
SNX3O60493 MIR6503-201ENST00000622884 86 ntBASIC5.45□□□□□ -1.54
SNX3O60493 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SNX3O60493 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX3O60493 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SNX3O60493 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX3O60493 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
SNX3O60493 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX3O60493 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX3O60493 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
SNX3O60493 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX3O60493 VN1R31P-201ENST00000417498 730 ntBASIC5.44□□□□□ -1.54
SNX3O60493 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX3O60493 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX3O60493 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 C1DP3-201ENST00000455013 423 ntBASIC5.44□□□□□ -1.54
SNX3O60493 AC092865.4-201ENST00000477936 615 ntBASIC5.44□□□□□ -1.54
SNX3O60493 RN7SL570P-201ENST00000484405 292 ntBASIC5.44□□□□□ -1.54
SNX3O60493 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX3O60493 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX3O60493 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX3O60493 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX3O60493 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX3O60493 MIR4311-201ENST00000580794 100 ntBASIC5.44□□□□□ -1.54
SNX3O60493 MIR4732-201ENST00000581873 76 ntBASIC5.44□□□□□ -1.54
SNX3O60493 MIR4701-201ENST00000583094 63 ntBASIC5.44□□□□□ -1.54
SNX3O60493 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
SNX3O60493 FAM60CP-201ENST00000591086 664 ntBASIC5.44□□□□□ -1.54
SNX3O60493 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX3O60493 AC022387.2-201ENST00000604050 448 ntBASIC5.44□□□□□ -1.54
SNX3O60493 FXYD6P1-201ENST00000604857 285 ntBASIC5.44□□□□□ -1.54
SNX3O60493 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AL122023.1-201ENST00000622847 530 ntBASIC5.44□□□□□ -1.54
SNX3O60493 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.44□□□□□ -1.54
SNX3O60493 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 AL731566.1-201ENST00000620490 1937 ntBASIC5.44□□□□□ -1.54
SNX3O60493 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 SMG1P7-201ENST00000565246 2704 ntBASIC5.44□□□□□ -1.54
SNX3O60493 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX3O60493 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SNX3O60493 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX3O60493 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SNX3O60493 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNX3O60493 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX3O60493 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SNX3O60493 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms