Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 AP000432.2-201ENST00000624164 2048 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TRIM38O00635 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 HSPD1P7-201ENST00000447985 1686 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 RNA5SP477-201ENST00000362639 119 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AL353692.2-201ENST00000407054 335 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 RPS26P13-201ENST00000419030 330 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC130360.1-201ENST00000425489 1117 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AL590399.4-201ENST00000436561 601 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AL158053.1-201ENST00000441503 453 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 RPL7L1P3-201ENST00000455249 689 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 MTND2P6-201ENST00000455337 1030 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 NPM1P17-201ENST00000479221 602 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC106872.4-201ENST00000510050 523 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM38O00635 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC130365.2-201ENST00000525882 1201 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC113192.3-201ENST00000529152 742 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.13□□□□□ -1.43
TRIM38O00635 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC007448.1-201ENST00000582714 234 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC011445.2-201ENST00000599274 173 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 AP001267.4-201ENST00000602598 545 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AP001823.1-201ENST00000604056 1003 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AL021368.3-201ENST00000607119 578 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC110792.4-201ENST00000609843 298 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 OR8G7P-201ENST00000616658 848 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC018628.1-201ENST00000624147 3819 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM38O00635 CCNT2P1-201ENST00000423082 1315 ntBASIC6.13□□□□□ -1.43
TRIM38O00635 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM38O00635 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM38O00635 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM38O00635 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 AP002512.4-202ENST00000641599 4530 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
TRIM38O00635 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM38O00635 RNA5SP273-201ENST00000362484 113 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TRIM38O00635 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 AL078595.1-201ENST00000404458 226 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
TRIM38O00635 RPL26P37-201ENST00000411983 438 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 CHEK2P5-201ENST00000423877 246 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 RPL23AP19-201ENST00000436229 369 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 AC016908.1-201ENST00000442571 1219 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 RN7SL174P-201ENST00000475578 289 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 PPIAP19-201ENST00000486414 492 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 SNORD46.2-201ENST00000516021 102 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 RNU6-1102P-201ENST00000516149 96 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 RNA5SP271-201ENST00000516700 88 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 IGKV1D-22-201ENST00000518953 324 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms