Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 GSTM5P1-201ENST00000434751 660 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 RN7SL172P-201ENST00000460535 303 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 RN7SL727P-201ENST00000482164 296 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 CDC42P3-201ENST00000518493 633 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC004825.1-201ENST00000555068 586 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 RBM22P1-201ENST00000578589 1214 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AL353729.2-201ENST00000605859 1249 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 AC109583.2-201ENST00000617367 129 ntBASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SMIM28A0A1B0GU29 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 C4BPAP1-201ENST00000415474 1893 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 NANOGP4-201ENST00000427230 913 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 OR52B5P-201ENST00000435337 951 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AL627308.1-201ENST00000435693 821 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CNOT7P2-201ENST00000441051 832 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 IGBP1P3-201ENST00000447449 1000 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AL672138.1-201ENST00000450604 1015 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC016590.3-201ENST00000611171 753 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AC016769.4-201ENST00000616893 535 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 OR52B5P-202ENST00000641118 1110 ntBASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMIM28A0A1B0GU29 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC005294.1-201ENST00000355509 281 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 MIR223-201ENST00000385204 110 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 OR4K12P-201ENST00000406538 961 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 DPPA2P3-201ENST00000411853 655 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 RPL23AP18-201ENST00000416139 468 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 FAM96AP1-201ENST00000430879 482 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC245047.2-201ENST00000441060 530 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC079841.1-201ENST00000481228 950 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms