Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RPS3AP15-201ENST00000483874 781 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 COX6B1P2-201ENST00000489624 230 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 IGBP1P1-201ENST00000554337 1009 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AC015802.2-201ENST00000589690 189 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AP002512.4-202ENST00000641599 4530 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 GTF2IP4-201ENST00000453092 2054 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AL137058.3-201ENST00000624531 3099 ntBASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.8□□□□□ -1.32
CTNNA3Q9UI47 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 RN7SKP293-201ENST00000411389 296 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 HMGN1P36-201ENST00000446623 298 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC023141.9-201ENST00000458734 412 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 OR7E157P-201ENST00000494376 911 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC021146.10-201ENST00000515628 706 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC139697.1-201ENST00000548429 745 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 DPPA2P4-201ENST00000563717 878 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC019322.1-201ENST00000571869 389 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 MIR3176-201ENST00000582210 90 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AP005431.1-201ENST00000618479 319 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC079776.5-201ENST00000641920 211 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 AC012078.1-201ENST00000405035 1646 ntBASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CTNNA3Q9UI47 MAPK10-338ENST00000641647 3362 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 RNF19BPY-201ENST00000458209 1550 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 OR13C1P-202ENST00000641378 2919 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 BCORP1-203ENST00000513194 5093 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 RNA5SP394-201ENST00000364216 119 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 U3.10-201ENST00000364459 214 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 RNA5SP30-201ENST00000365552 115 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 HMGB1P20-201ENST00000402555 677 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 NENFP1-201ENST00000419476 466 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 LRRC37A14P-201ENST00000452297 462 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 RPS23P6-201ENST00000466136 431 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC087672.1-201ENST00000479876 766 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 NPM1P28-201ENST00000492269 840 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC020978.7-201ENST00000575953 1187 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 MIR193BHG-214ENST00000641765 509 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 AC015689.2-201ENST00000528172 1738 ntBASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CTNNA3Q9UI47 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CTNNA3Q9UI47 AC007842.1-201ENST00000597336 2039 ntBASIC6.77□□□□□ -1.32
CTNNA3Q9UI47 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CTNNA3Q9UI47 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms