Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AL627308.1-201ENST00000435693 821 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 CYCSP12-201ENST00000437729 300 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 GAPDHP25-201ENST00000447061 1001 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC007386.1-201ENST00000455212 582 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 SCARNA20.4-201ENST00000516969 131 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 IGLV2-28-201ENST00000520681 304 ntBASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.42□□□□□ -1.22
NPC1L1Q9UHC9 AL359955.1-201ENST00000455242 3275 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 RN7SKP162-201ENST00000363605 345 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 SNORD56.6-201ENST00000384569 71 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 PPIAP9-201ENST00000403866 498 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 RPEP1-201ENST00000504507 658 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 RNA5SP34-201ENST00000516887 130 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AP006245.2-201ENST00000522004 300 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC027026.1-201ENST00000532323 742 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC079395.2-201ENST00000610982 737 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 MIR6133-201ENST00000617057 108 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 WBP1LP8-201ENST00000617401 327 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AC006600.2-201ENST00000624834 2506 ntBASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPC1L1Q9UHC9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AC007938.2-201ENST00000604666 2634 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 U3.2-201ENST00000362981 210 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 RN7SKP145-201ENST00000363291 303 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 RNU1-146P-201ENST00000364015 165 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 RNA5SP487-201ENST00000410186 122 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AL390774.1-201ENST00000411924 246 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 MED28P3-201ENST00000444288 531 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 RPL7P45-201ENST00000455851 743 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 NMNAT1P5-201ENST00000559657 841 ntBASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPC1L1Q9UHC9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPC1L1Q9UHC9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPC1L1Q9UHC9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPC1L1Q9UHC9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPC1L1Q9UHC9 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPC1L1Q9UHC9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.39□□□□□ -1.23
NPC1L1Q9UHC9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPC1L1Q9UHC9 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms