Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 RPS10P14-201ENST00000440748 502 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AL133480.2-201ENST00000456723 487 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 RPLP0P1-201ENST00000457002 361 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC091544.1-201ENST00000484702 348 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 HMGN1P13-201ENST00000505795 138 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC100823.2-201ENST00000518337 699 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 GTF2IP11-201ENST00000526931 420 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 OR5AN2P-201ENST00000534535 896 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC008083.2-201ENST00000546707 476 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AL512360.1-201ENST00000555346 234 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AL390334.1-201ENST00000556395 450 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 FAM30C-201ENST00000561158 410 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC024085.1-201ENST00000604299 432 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC087623.4-201ENST00000606593 695 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC019193.2-201ENST00000610012 634 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC016582.1-202ENST00000636341 2982 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AC112487.2-201ENST00000637950 304 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 OR2A3P-202ENST00000641249 1776 ntBASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.07□□□□□ -1.12
LIMD1Q9UGP4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 IMMTP1-201ENST00000435590 2219 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 U8.14-201ENST00000390843 143 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RNA5SP185-201ENST00000390963 114 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AL589647.1-201ENST00000402485 466 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 PPIAP30-201ENST00000415473 519 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RPL23AP4-201ENST00000427757 463 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 PGBD4P3-201ENST00000440731 581 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 SNORA35.1-201ENST00000458908 128 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 WBP1LP1-201ENST00000460451 896 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CBX5P1-201ENST00000468470 561 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC087312.1-201ENST00000471411 480 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RN7SL635P-201ENST00000492123 296 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RNU6-885P-201ENST00000516607 104 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 IGHV7-40-201ENST00000520963 296 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 DEFB131D-201ENST00000526803 184 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 FAM92A1P1-201ENST00000528023 890 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 ARL2BPP2-201ENST00000550907 489 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 HMGN1P26-201ENST00000558737 303 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC009977.1-201ENST00000586015 570 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC079315.1-201ENST00000602952 623 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AL138693.1-201ENST00000622219 129 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 HSPA8P17-201ENST00000427029 1382 ntBASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.06□□□□□ -1.12
LIMD1Q9UGP4 AC110998.1-201ENST00000519029 2053 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms