Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 PPIAP20-201ENST00000449839 135 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 VN1R38P-201ENST00000450265 887 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL133351.3-201ENST00000454998 193 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC010343.2-201ENST00000510162 224 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 SCARNA1-201ENST00000517138 166 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AP003080.1-202ENST00000526526 915 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC027369.2-201ENST00000528030 440 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC036111.2-201ENST00000533247 901 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 MIR4301-201ENST00000577203 66 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 MIR5095-201ENST00000578844 88 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AP005136.2-201ENST00000583253 1049 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC097467.4-201ENST00000605504 141 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AP001437.1-201ENST00000608783 456 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC092681.3-201ENST00000609463 678 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC245100.7-201ENST00000609678 442 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC104763.3-201ENST00000613765 618 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC078880.5-201ENST00000617845 421 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AL606537.1-201ENST00000607258 2011 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 AP005432.1-201ENST00000580891 3485 ntBASIC5.8□□□□□ -1.48
LRFN1Q9P244 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.8□□□□□ -1.48
LRFN1Q9P244 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRFN1Q9P244 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC093297.3-201ENST00000607056 2517 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 HSPD1P9-201ENST00000420325 1636 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 COX6B1P3-201ENST00000312310 260 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RNA5SP346-201ENST00000363541 121 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RNU6-468P-201ENST00000384003 109 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RNU6-1000P-201ENST00000391066 106 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RSL24D1P1-201ENST00000404972 493 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 SNORA77.2-201ENST00000408571 112 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RN7SKP222-201ENST00000410651 315 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RN7SKP108-201ENST00000411367 328 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC022022.1-201ENST00000430304 178 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC005189.1-201ENST00000431286 310 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC044797.1-201ENST00000445744 679 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL590004.3-202ENST00000445883 451 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL133244.1-201ENST00000456007 258 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC068228.1-201ENST00000461723 211 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC104115.2-201ENST00000523026 687 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AP000859.1-201ENST00000525536 307 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC090115.2-201ENST00000548060 883 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL358913.1-201ENST00000554342 121 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC090826.1-203ENST00000569235 490 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AC007448.1-201ENST00000582714 234 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 OR1AB1P-201ENST00000585564 761 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL136097.3-201ENST00000611097 505 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 AL080312.2-201ENST00000613001 630 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 VN1R9P-201ENST00000614184 867 ntBASIC5.79□□□□□ -1.48
LRFN1Q9P244 RMST_10.1-201ENST00000616309 154 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms