Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 VDAC2P4-201ENST00000452925 711 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RN7SL124P-201ENST00000498656 285 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC017037.1-201ENST00000508460 471 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 MTND6P19-201ENST00000519399 524 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AP001893.2-201ENST00000526949 202 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC023206.1-201ENST00000605824 298 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC098614.4-201ENST00000607601 462 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 PTCHD3P1-201ENST00000612350 537 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL121890.2-201ENST00000617644 465 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC005609.2-201ENST00000623320 592 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC010653.3-201ENST00000635332 232 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC087821.2-201ENST00000637086 450 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RPL36AP21-202ENST00000639134 430 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL359922.2-201ENST00000581788 3017 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 NBPF8-201ENST00000583271 5330 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 LINC02128-205ENST00000641755 1334 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC103591.2-201ENST00000265259 766 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RNA5SP389-201ENST00000362610 115 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RNA5SP226-201ENST00000362653 115 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RNU6-1090P-201ENST00000364065 94 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SSX9-201ENST00000376909 591 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SNORA10B-201ENST00000384458 133 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RN7SKP58-201ENST00000411010 305 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RPL12P9-201ENST00000412942 488 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RPL17P12-201ENST00000413391 526 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL161631.1-201ENST00000417933 486 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 RPL7P31-201ENST00000450192 724 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 EIF3LP2-201ENST00000457262 807 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC117394.1-201ENST00000477323 567 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 DUTP7-201ENST00000507982 486 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC009646.1-201ENST00000510455 318 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 OR5M4P-201ENST00000529436 925 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AF131215.2-201ENST00000531549 1710 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 OR5AN2P-201ENST00000534535 896 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms