Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RNA5SP30-201ENST00000365552 115 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RPL11P3-201ENST00000395256 523 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC096921.1-201ENST00000411661 375 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 HMGN1P20-201ENST00000411849 300 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RNGTTP1-201ENST00000420965 728 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RPL5P10-201ENST00000445207 894 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RPS23P2-201ENST00000463671 415 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 MRE11P1-201ENST00000464884 2127 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 RPS3AP15-201ENST00000483874 781 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC104997.1-201ENST00000519761 717 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 IGKV2-4-201ENST00000523070 340 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 MRPS16P1-201ENST00000523462 412 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AGGF1P7-201ENST00000562369 913 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC025857.2-201ENST00000602711 238 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 OR51C1P-201ENST00000608504 942 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC015722.2-201ENST00000622210 551 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC123769.1-201ENST00000530992 3192 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 AC009962.1-201ENST00000567327 3813 ntBASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.36□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC004076.2-201ENST00000620532 3323 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 RNA5SP394-201ENST00000364216 119 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 RNU6-1263P-201ENST00000384601 106 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 SNORD65-201ENST00000391079 73 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC087752.1-201ENST00000391360 558 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC005042.1-201ENST00000393397 800 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 ST13P16-201ENST00000401760 781 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 HMGB1P20-201ENST00000402555 677 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 GLUD1P9-201ENST00000420997 1173 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AL022331.1-201ENST00000429025 477 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 MTCO1P45-201ENST00000431457 267 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 TXNP2-201ENST00000443918 295 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 NDUFA5P8-201ENST00000449019 346 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 CCRL1P1-201ENST00000449542 1053 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC104629.2-201ENST00000468627 598 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 GAPDHP62-201ENST00000515313 990 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 SNORA70.20-201ENST00000516848 126 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC008147.3-201ENST00000548666 354 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC016839.1-201ENST00000578162 867 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC026367.3-201ENST00000619032 590 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC104820.1-201ENST00000624183 307 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 AC119674.1-220ENST00000641502 1048 ntBASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.35□□□□□ -1.39
BLOC1S4Q9NUP1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms