Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC023490.2-201ENST00000359859 470 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 EEF1B2P8-201ENST00000414101 671 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL596448.1-201ENST00000415024 392 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CYCSP51-201ENST00000443545 318 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC092106.1-201ENST00000444291 373 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 TAAR4P-201ENST00000454843 1039 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 CYCSP22-201ENST00000517555 339 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 MRPS21P7-201ENST00000566937 238 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 MIR1910-201ENST00000636955 80 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 NR1H5P-201ENST00000452683 1377 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AC125336.1-201ENST00000508893 2827 ntBASIC5.52□□□□□ -1.53
TREX1Q9NSU2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC109446.4-201ENST00000623235 2755 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 SNORD56.6-201ENST00000384569 71 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 BMS1P17-202ENST00000416720 316 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AL133173.1-201ENST00000423458 397 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 Z84478.1-201ENST00000438230 1219 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AL450996.1-201ENST00000445574 1202 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC105420.1-201ENST00000504389 582 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 NRBF2P4-201ENST00000520874 850 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 OR11H3P-201ENST00000554547 982 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AL356608.1-201ENST00000610034 820 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC135068.5-201ENST00000624197 983 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC073869.8-201ENST00000641806 335 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 AC005261.6-201ENST00000623072 1387 ntBASIC5.51□□□□□ -1.53
TREX1Q9NSU2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TREX1Q9NSU2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 MTCO1P7-201ENST00000419523 1542 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 RNA5SP46-201ENST00000362370 120 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 MIR551A-201ENST00000385042 96 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 RPS3P2-201ENST00000421346 701 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 RPL34P3-201ENST00000421454 338 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AL035090.1-201ENST00000454835 332 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 LDHBP2-201ENST00000456969 1005 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms