Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC072039.2-201ENST00000608883 439 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC087241.4-201ENST00000612441 480 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC092794.1-201ENST00000612734 582 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC122133.1-201ENST00000613964 233 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC073862.4-201ENST00000622982 854 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC092656.1-203ENST00000624134 423 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC005858.3-201ENST00000624756 589 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 UGT2B27P-201ENST00000505092 1620 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC009220.2-201ENST00000489759 1751 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL391261.1-201ENST00000555712 1479 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RNA5SP152-201ENST00000365184 110 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 BTF3P8-201ENST00000414577 526 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RPL7P53-201ENST00000421245 739 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL672212.1-201ENST00000422246 400 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC245452.2-201ENST00000435222 392 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 MTATP6P13-201ENST00000438531 667 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RPL23AP28-201ENST00000448062 470 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RNU7-157P-201ENST00000459600 66 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC068724.1-201ENST00000487100 792 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC117395.1-201ENST00000487390 403 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RN7SL561P-201ENST00000488553 281 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 NDUFB4P12-201ENST00000513465 390 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RNU2-30P-201ENST00000516209 141 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 TMEM97P2-201ENST00000517841 403 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 HMGN1P26-201ENST00000558737 303 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC004232.1-201ENST00000571388 208 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC012254.4-201ENST00000588843 273 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OR7A8P-201ENST00000595427 913 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 DUXAP11-201ENST00000603858 526 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL445647.2-201ENST00000615170 130 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 MRPL57P3-201ENST00000619218 176 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 VN1R7P-201ENST00000619242 903 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AL354718.1-201ENST00000619764 589 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms