Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 LINC02210-201ENST00000444561 288 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 SNORD125-201ENST00000459538 96 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC092865.4-201ENST00000477936 615 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RPL12P30-201ENST00000488389 499 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AP002453.1-201ENST00000492327 668 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RNU6-964P-201ENST00000516524 69 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 MIR212-201ENST00000586026 110 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AL357562.1-201ENST00000624911 609 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 AC000374.1-201ENST00000434698 1745 ntBASIC4.2□□□□□ -1.74
AP1S3Q96PC3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.2□□□□□ -1.74
AP1S3Q96PC3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL034370.1-201ENST00000397254 1590 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 SNORA64.3-201ENST00000365647 134 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 U3.28-201ENST00000391249 210 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC233289.1-201ENST00000403700 508 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 Z68694.1-201ENST00000413929 841 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC009784.1-201ENST00000426484 460 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC128677.1-201ENST00000436016 442 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RPEP4-201ENST00000437636 602 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 EIF5AP4-201ENST00000441206 465 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC245291.3-201ENST00000443400 292 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL590004.3-202ENST00000445883 451 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL445466.1-201ENST00000448432 357 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RPS23P9-201ENST00000448848 438 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RPS23P2-201ENST00000463671 415 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RN7SL188P-201ENST00000469842 285 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 OR7E22P-201ENST00000478335 1035 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC099521.1-201ENST00000482557 334 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RN7SL657P-201ENST00000582431 293 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC145423.1-201ENST00000605712 336 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC012511.1-201ENST00000608140 449 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL512652.1-201ENST00000619006 500 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 FAM27E2-201ENST00000619668 403 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC021766.1-201ENST00000624404 741 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 LYARP1-201ENST00000436977 1501 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 RBPJP2-201ENST00000618187 1444 ntBASIC4.19□□□□□ -1.74
AP1S3Q96PC3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AP1S3Q96PC3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
AP1S3Q96PC3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
AP1S3Q96PC3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP1S3Q96PC3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP1S3Q96PC3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms