Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR3157-201ENST00000578688 85 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC006006.1-201ENST00000603082 144 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC010680.4-201ENST00000605334 543 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC087894.3-201ENST00000623682 349 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 CASC19-206ENST00000641028 1430 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 RNU5B-1-201ENST00000363286 116 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 Y_RNA.453-201ENST00000384223 109 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 PTPN2P1-201ENST00000423212 1072 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 MYO5BP3-201ENST00000431872 1279 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC005040.1-201ENST00000437783 482 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC009237.4-201ENST00000441078 238 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 IPO7P1-201ENST00000442031 636 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 Z99127.3-201ENST00000448158 395 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 RFC5P1-201ENST00000454419 874 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL583843.1-201ENST00000456070 346 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 RN7SL325P-201ENST00000460434 283 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 RN7SL751P-201ENST00000473281 284 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 HMGN1P12-201ENST00000499125 195 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 ARL2BPP4-201ENST00000506854 471 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 TCP11X3P-202ENST00000514289 1254 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AP005597.2-201ENST00000526238 341 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL445383.1-201ENST00000554689 874 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL121821.2-201ENST00000556081 394 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL031846.1-201ENST00000560933 314 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 MIR4795-201ENST00000584182 89 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 RPSAP66-201ENST00000592196 606 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 BNIP3P22-201ENST00000593399 556 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC006539.2-201ENST00000601729 572 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL356986.1-201ENST00000604085 341 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL050343.2-201ENST00000607338 280 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AL589743.7-201ENST00000612637 233 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC009233.1-201ENST00000616477 371 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC008626.2-201ENST00000624425 248 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC140479.4-205ENST00000636339 820 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 Z99496.1-201ENST00000469424 1477 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC013268.3-201ENST00000262716 2324 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC106872.5-201ENST00000508856 1416 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 AC090643.1-201ENST00000623600 3100 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.36□□□□□ -1.07
TRIM47Q96LD4 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TRIM47Q96LD4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms